RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SVBPQ8N300 66 aa10.97□□□□□ -0.65
PCDHGC3-204ENST00000617222 RPS10P5Q9NQ39 176 aa10.97□□□□□ -0.65
PCDHGC3-204ENST00000617222 KLK5Q9Y337 293 aaPredicted RBP10.97□□□□□ -0.65
PCDHGC3-204ENST00000617222 A0A0J9YY99 117 aa10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 FAM3BP58499 235 aaPredicted RBP10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 RHEBQ15382 184 aa10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 UFSP1Q6NVU6 142 aa10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 TMEM88Q6PEY1 159 aa10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 ZFP2Q6ZN57 461 aa10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 HHLA3Q9XRX5 114 aa10.96□□□□□ -0.65
PCDHGC3-204ENST00000617222 TRAV26-1A0A087WT03 109 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 RHODO00212 210 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 SNAPINO95295 136 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 TRGC1P0CF51 173 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 SMIM17P0DL12 118 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 EVI2AP22794 236 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 SLAQ13239 276 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 RIGQ13278 110 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 Q6ZSN1 163 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 PRO0255Q9UI72 69 aa10.95□□□□□ -0.66
PCDHGC3-204ENST00000617222 A0A087WWC5 75 aa10.94□□□□□ -0.66
PCDHGC3-204ENST00000617222 PAX4O43316 350 aa10.94□□□□□ -0.66
PCDHGC3-204ENST00000617222 CRYBA4P53673 196 aa10.94□□□□□ -0.66
PCDHGC3-204ENST00000617222 VSIG2Q96IQ7 327 aa10.94□□□□□ -0.66
PCDHGC3-204ENST00000617222 FAM210BQ96KR6 192 aa10.94□□□□□ -0.66
PCDHGC3-204ENST00000617222 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
PCDHGC3-204ENST00000617222 LINC00315P59091 139 aa10.93□□□□□ -0.66
PCDHGC3-204ENST00000617222 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
PCDHGC3-204ENST00000617222 IMMP2LQ96T52 175 aa10.93□□□□□ -0.66
PCDHGC3-204ENST00000617222 TMEM242Q9NWH2 141 aa10.93□□□□□ -0.66
PCDHGC3-204ENST00000617222 DNAH7Q8WXX0 4024 aa10.93□□□□□ -0.66
PCDHGC3-204ENST00000617222 F5H697 171 aa10.92□□□□□ -0.66
PCDHGC3-204ENST00000617222 MGPP08493 103 aa10.92□□□□□ -0.66
PCDHGC3-204ENST00000617222 ZNF56Q15929 161 aa10.92□□□□□ -0.66
PCDHGC3-204ENST00000617222 MRPL54Q6P161 138 aaKnown RBP10.92□□□□□ -0.66
PCDHGC3-204ENST00000617222 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
PCDHGC3-204ENST00000617222 DPH3P1Q9H4G8 78 aa10.92□□□□□ -0.66
PCDHGC3-204ENST00000617222 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
PCDHGC3-204ENST00000617222 CAMPP49913 170 aa10.91□□□□□ -0.66
PCDHGC3-204ENST00000617222 RAB4BP61018 213 aa10.91□□□□□ -0.66
PCDHGC3-204ENST00000617222 KCNIP4Q6PIL6 250 aa10.91□□□□□ -0.66
PCDHGC3-204ENST00000617222 ATRAIDQ6UW56 229 aa10.91□□□□□ -0.66
PCDHGC3-204ENST00000617222 APLNQ9ULZ1 77 aa10.91□□□□□ -0.66
PCDHGC3-204ENST00000617222 NACAE9PAV3 2078 aa10.9□□□□□ -0.66
PCDHGC3-204ENST00000617222 LOC100131303A0A0U1RQF7 123 aa10.9□□□□□ -0.66
PCDHGC3-204ENST00000617222 H3BNG1 76 aa10.9□□□□□ -0.66
PCDHGC3-204ENST00000617222 NUDT3O95989 172 aa10.9□□□□□ -0.66
PCDHGC3-204ENST00000617222 PRADC1Q9BSG0 188 aa10.9□□□□□ -0.66
PCDHGC3-204ENST00000617222 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.66
PCDHGC3-204ENST00000617222 K7EQD1 137 aa10.89□□□□□ -0.67
PCDHGC3-204ENST00000617222 GYPEP15421 78 aa10.89□□□□□ -0.67
PCDHGC3-204ENST00000617222 S100PP25815 95 aa10.89□□□□□ -0.67
PCDHGC3-204ENST00000617222 RHOHQ15669 191 aa10.89□□□□□ -0.67
PCDHGC3-204ENST00000617222 C15orf53Q8NAA6 179 aa10.89□□□□□ -0.67
PCDHGC3-204ENST00000617222 BTF3L4Q96K17 158 aa10.89□□□□□ -0.67
PCDHGC3-204ENST00000617222 TMEM191AQ9H0A3 160 aa10.89□□□□□ -0.67
PCDHGC3-204ENST00000617222 A0A1B0GW15 77 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 A0A1B0GXF2 115 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 P0DMU3 169 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 FAM231AP0DMU4 169 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 FAM231CP0DMU5 169 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 TCTAP57738 103 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 HBBP68871 147 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 Q9UF83 564 aa10.88□□□□□ -0.67
PCDHGC3-204ENST00000617222 A0A096LPF7 62 aa10.87□□□□□ -0.67
PCDHGC3-204ENST00000617222 S100A8P05109 93 aa10.87□□□□□ -0.67
PCDHGC3-204ENST00000617222 MRPL23Q16540 153 aaKnown RBP10.87□□□□□ -0.67
PCDHGC3-204ENST00000617222 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
PCDHGC3-204ENST00000617222 AMN1Q8IY45 258 aa10.87□□□□□ -0.67
PCDHGC3-204ENST00000617222 ICOSQ9Y6W8 199 aa10.87□□□□□ -0.67
PCDHGC3-204ENST00000617222 TRAV9-1A0A075B6T8 112 aa10.86□□□□□ -0.67
PCDHGC3-204ENST00000617222 GAGE12JA6NER3 117 aa10.86□□□□□ -0.67
PCDHGC3-204ENST00000617222 GAGE1Q13065 139 aa10.86□□□□□ -0.67
PCDHGC3-204ENST00000617222 GAGE4Q13068 117 aa10.86□□□□□ -0.67
PCDHGC3-204ENST00000617222 GAGE5Q13069 117 aa10.86□□□□□ -0.67
PCDHGC3-204ENST00000617222 GAGE13Q4V321 117 aa10.86□□□□□ -0.67
PCDHGC3-204ENST00000617222 RNF185Q96GF1 192 aa10.86□□□□□ -0.67
PCDHGC3-204ENST00000617222 DYNC2H1Q8NCM8 4307 aaKnown RBP10.85□□□□□ -0.67
PCDHGC3-204ENST00000617222 TRAV26-2A0A0B4J265 109 aa10.85□□□□□ -0.67
PCDHGC3-204ENST00000617222 M0QY20 66 aa10.85□□□□□ -0.67
PCDHGC3-204ENST00000617222 RAB4AP20338 218 aa10.85□□□□□ -0.67
PCDHGC3-204ENST00000617222 SRIP30626 198 aa10.85□□□□□ -0.67
PCDHGC3-204ENST00000617222 TRBV10-1A0A0K0K1A3 114 aa10.84□□□□□ -0.67
PCDHGC3-204ENST00000617222 H7C1H1 209 aa10.84□□□□□ -0.67
PCDHGC3-204ENST00000617222 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
PCDHGC3-204ENST00000617222 GATD1Q8NB37 220 aa10.84□□□□□ -0.67
PCDHGC3-204ENST00000617222 ZNRF2Q8NHG8 242 aa10.84□□□□□ -0.67
PCDHGC3-204ENST00000617222 RPL36AP83881 106 aaKnown RBP10.83□□□□□ -0.68
PCDHGC3-204ENST00000617222 RASL11AQ6T310 242 aa10.83□□□□□ -0.68
PCDHGC3-204ENST00000617222 NEGR1Q7Z3B1 354 aa10.83□□□□□ -0.68
PCDHGC3-204ENST00000617222 NEXN-AS1Q8NBZ9 246 aa10.83□□□□□ -0.68
PCDHGC3-204ENST00000617222 RPL36ALQ969Q0 106 aaKnown RBP10.83□□□□□ -0.68
PCDHGC3-204ENST00000617222 STARD9Q9P2P6 4700 aa10.83□□□□□ -0.68
PCDHGC3-204ENST00000617222 TGIF2-C20orf24A0A0A6YYL0 155 aa10.82□□□□□ -0.68
PCDHGC3-204ENST00000617222 ELOBQ15370 118 aa10.82□□□□□ -0.68
PCDHGC3-204ENST00000617222 MRPL51Q4U2R6 128 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms