RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CBY3A6NI87 242 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 LEPP41159 167 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 ZNF664Q8N3J9 261 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 DUSP14O95147 198 aaKnown RBP5.72□□□□□ -1.49
NEK3-207ENST00000617054 ERASQ7Z444 233 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
NEK3-207ENST00000617054 SPAG8Q99932 426 aaPredicted RBP5.72□□□□□ -1.49
NEK3-207ENST00000617054 IGHV1OR15-1A0A075B7D0 117 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 RPL35AP18077 110 aaKnown RBP5.72□□□□□ -1.49
NEK3-207ENST00000617054 FA2HQ7L5A8 372 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 STHQ8IWL8 128 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 U3KQK5 164 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 IGHV3-16A0A0C4DH30 117 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 OR11H12B2RN74 326 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 TCAPO15273 167 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 SMIM15Q7Z3B0 74 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 NEGR1Q7Z3B1 354 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 Q8N976 141 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 PAM16Q9Y3D7 125 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 A0A096LNJ9 63 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 LEPROTL1O95214 131 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 AZU1P20160 251 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 TSPOP30536 169 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 LINC01587Q99440 93 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 SCRT2Q9NQ03 307 aa5.71□□□□□ -1.5
NEK3-207ENST00000617054 TRBV7-9A0A0J9YWB2 115 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 F5H697 171 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 C18orf15Q96N68 181 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 IGLV1-51P01701 117 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 TCTAP57738 103 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 ZNF876PQ49A33 203 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 OR2K2Q8NGT1 345 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 IGHV4-4A0A075B6R2 117 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 A0A1B0GV90 55 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 LCE2BO14633 110 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 CACNG7P62955 275 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 NDUFA11Q86Y39 141 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 DEFB125Q8N687 156 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 NRACQ8N912 160 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 CHCHD1Q96BP2 118 aaKnown RBP5.7□□□□□ -1.5
NEK3-207ENST00000617054 TMEM208Q9BTX3 173 aa5.7□□□□□ -1.5
NEK3-207ENST00000617054 DDTP30046 118 aa5.69□□□□□ -1.5
NEK3-207ENST00000617054 RASL10AQ92737 203 aa5.69□□□□□ -1.5
NEK3-207ENST00000617054 Q9UF83 564 aa5.69□□□□□ -1.5
NEK3-207ENST00000617054 DEFA6Q01524 100 aa5.69□□□□□ -1.5
NEK3-207ENST00000617054 LINC00482Q8N8I6 264 aa5.69□□□□□ -1.5
NEK3-207ENST00000617054 ODF3Q96PU9 254 aa5.69□□□□□ -1.5
NEK3-207ENST00000617054 MAP1LC3AQ9H492 121 aa5.69□□□□□ -1.5
NEK3-207ENST00000617054 DPH3P1Q9H4G8 78 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 SMIM17P0DL12 118 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 LINC00315P59091 139 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 TP73-AS1Q9UF72 201 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 NOTCH1P46531 2555 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 P0DMU3 169 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 FAM231AP0DMU4 169 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 FAM231CP0DMU5 169 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 C1orf158Q8N1D5 194 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 C9orf85Q96MD7 179 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 AP1S3Q96PC3 154 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 C19orf73Q9NVV2 129 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 KIF25-AS1Q9Y6Z4 181 aa5.68□□□□□ -1.5
NEK3-207ENST00000617054 TRAV2A0A0B4J234 112 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 TRAV25A0A0B4J276 109 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 PKIAP61925 76 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 TMEM70Q9BUB7 260 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 MRPL16Q9NX20 251 aaKnown RBP5.67□□□□□ -1.5
NEK3-207ENST00000617054 SYS1-DBNDD2H3BUS1 97 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 PPBPP02775 128 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 GIG44P09565 113 aaPredicted RBP5.67□□□□□ -1.5
NEK3-207ENST00000617054 ZNF56Q15929 161 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 SUMO4Q6EEV6 95 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 TRPT1Q86TN4 253 aaKnown RBP5.67□□□□□ -1.5
NEK3-207ENST00000617054 LURAP1LQ8IV03 231 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 CMYA5Q8N3K9 4069 aa5.67□□□□□ -1.5
NEK3-207ENST00000617054 IGLV2-18A0A075B6J9 118 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 CRYGDP07320 174 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 TMEM158Q8WZ71 300 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 ZNF747Q9BV97 191 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 hDV102S1A0JD36 115 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 TIRAPP58753 221 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 LINC00469Q8N7U9 141 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 A8MTW9 85 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 INSP01308 110 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 IGLL1P15814 213 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 BEAN1Q3B7T3 259 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 KRTAP24-1Q3LI83 254 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 DNLZQ5SXM8 178 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 TEX43Q6ZNM6 134 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 CITED1Q99966 193 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 VAMP8Q9BV40 100 aa5.66□□□□□ -1.5
NEK3-207ENST00000617054 EMP1P54849 157 aa5.65□□□□□ -1.5
NEK3-207ENST00000617054 SUMO2P61956 95 aaKnown RBP5.65□□□□□ -1.5
NEK3-207ENST00000617054 Q6ZSN1 163 aa5.65□□□□□ -1.5
NEK3-207ENST00000617054 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
NEK3-207ENST00000617054 CSTL1Q9H114 145 aa5.65□□□□□ -1.5
NEK3-207ENST00000617054 TSTD3H0UI37 97 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 NXPH4O95158 308 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 IGHV3-53P01767 116 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 HBDP02042 147 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 MED14OSP0DP75 135 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms