RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 IGHV3-11P01762 117 aa10.43□□□□□ -0.74
PPP4R3B-205ENST00000616288 CTSZQ9UBR2 303 aa10.43□□□□□ -0.74
PPP4R3B-205ENST00000616288 K7EIM0 57 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 P0DMU3 169 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 FAM231AP0DMU4 169 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 FAM231CP0DMU5 169 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 CEMP1Q6PRD7 247 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 LINC00526Q96FQ7 95 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 V9GYY9 64 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 BUB1B-PAK6H3BSN5 160 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 H7C423 109 aa10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 DAZ1Q9NQZ3 744 aaKnown RBP10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
PPP4R3B-205ENST00000616288 PTPRSQ13332 1948 aa10.41□□□□□ -0.74
PPP4R3B-205ENST00000616288 LINC00158P58513 81 aa10.41□□□□□ -0.74
PPP4R3B-205ENST00000616288 LINC01619G3V211 115 aa10.41□□□□□ -0.74
PPP4R3B-205ENST00000616288 Q9HAA7 133 aa10.41□□□□□ -0.74
PPP4R3B-205ENST00000616288 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
PPP4R3B-205ENST00000616288 TMEM258P61165 79 aa10.41□□□□□ -0.74
PPP4R3B-205ENST00000616288 HTTP42858 3142 aa10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 B9A039 149 aa10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 I3L3M4 83 aa10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 PAX4O43316 350 aa10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 IMUPQ9GZP8 106 aa10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 HAMPP81172 84 aa10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 ZNF71Q9NQZ8 489 aaPredicted RBP10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 MDFICQ9P1T7 246 aa10.4□□□□□ -0.74
PPP4R3B-205ENST00000616288 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
PPP4R3B-205ENST00000616288 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
PPP4R3B-205ENST00000616288 WNK1Q9H4A3 2382 aa10.39□□□□□ -0.75
PPP4R3B-205ENST00000616288 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
PPP4R3B-205ENST00000616288 IGLV2-23P01705 113 aa10.39□□□□□ -0.75
PPP4R3B-205ENST00000616288 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
PPP4R3B-205ENST00000616288 TRBV30A0A0K0K1B3 111 aa10.38□□□□□ -0.75
PPP4R3B-205ENST00000616288 OVOL1O14753 267 aa10.38□□□□□ -0.75
PPP4R3B-205ENST00000616288 GHRHP01286 108 aa10.38□□□□□ -0.75
PPP4R3B-205ENST00000616288 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
PPP4R3B-205ENST00000616288 TMEM178BH3BS89 294 aa10.38□□□□□ -0.75
PPP4R3B-205ENST00000616288 ARRDC1-AS1Q9H2J1 176 aa10.38□□□□□ -0.75
PPP4R3B-205ENST00000616288 NBEAQ8NFP9 2946 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 BSPH1Q075Z2 132 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 NRACQ8N912 160 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 C14orf132Q9NPU4 83 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 F6UB75 175 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 COL5A1P20908 1838 aaPredicted RBP10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 UBE2L6O14933 153 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 LOXP28300 417 aaPredicted RBP10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 TMEM263Q8WUH6 116 aaKnown RBP10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 DEFB1P60022 68 aa10.37□□□□□ -0.75
PPP4R3B-205ENST00000616288 NXPH4O95158 308 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 CGB3P0DN86 165 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 CGB7P0DN87 165 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 CD59P13987 128 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 PFN2P35080 140 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 LINC01587Q99440 93 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 JPT2Q9H910 190 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 PAX8Q06710 450 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 Q6ZSV7 163 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 FDCSPQ8NFU4 85 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 UBL5Q9BZL1 73 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 PTPRBP23467 1997 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 TNFRSF13BO14836 293 aaPredicted RBP10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 TMEM105Q8N8V8 129 aa10.36□□□□□ -0.75
PPP4R3B-205ENST00000616288 SERP2Q8N6R1 65 aa10.35□□□□□ -0.75
PPP4R3B-205ENST00000616288 Q9H8V8 135 aa10.35□□□□□ -0.75
PPP4R3B-205ENST00000616288 KIR2DL5BQ8NHK3 375 aa10.35□□□□□ -0.75
PPP4R3B-205ENST00000616288 TEX22C9J3V5 150 aa10.35□□□□□ -0.75
PPP4R3B-205ENST00000616288 RPL35AP18077 110 aaKnown RBP10.35□□□□□ -0.75
PPP4R3B-205ENST00000616288 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
PPP4R3B-205ENST00000616288 RIF1Q5UIP0 2472 aaKnown RBP10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 FAM236DA0A1B0GTK5 79 aa10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 IGHG2P01859 326 aa10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 FAM236CP0DP71 79 aa10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 SPEGQ15772 3267 aa10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 CHD7Q9P2D1 2997 aa10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 PTPRQQ9UMZ3 2332 aa10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 MUC22E2RYF6 1773 aaPredicted RBP10.34□□□□□ -0.75
PPP4R3B-205ENST00000616288 IGHV3OR16-10A0A075B7F0 116 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 A0A087WVE0 104 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 TSPEAR-AS2P59090 65 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 MPLKIPQ8TAP9 179 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 TIMM17AQ99595 171 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 LAMTOR3Q9UHA4 124 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 NDUFC2O95298 119 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 LINC00311Q8N616 119 aa10.33□□□□□ -0.76
PPP4R3B-205ENST00000616288 LHBP01229 141 aa10.32□□□□□ -0.76
PPP4R3B-205ENST00000616288 WT1P19544 449 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3B-205ENST00000616288 MSMPQ1L6U9 139 aa10.32□□□□□ -0.76
PPP4R3B-205ENST00000616288 FAM240AA0A1B0GVK7 77 aa10.32□□□□□ -0.76
PPP4R3B-205ENST00000616288 LST1O00453 97 aa10.32□□□□□ -0.76
PPP4R3B-205ENST00000616288 WISP2O76076 250 aa10.32□□□□□ -0.76
PPP4R3B-205ENST00000616288 FSTL3O95633 263 aa10.32□□□□□ -0.76
PPP4R3B-205ENST00000616288 RNF5Q99942 180 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms