RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 Q71RC1 249 aaPredicted RBP14.56□□□□□ -0.08
SPAST-203ENST00000615843 C5orf38Q86SI9 138 aa14.56□□□□□ -0.08
SPAST-203ENST00000615843 PSMB8P28062 276 aa14.55□□□□□ -0.08
SPAST-203ENST00000615843 NDUFV3P56181 108 aaKnown RBP14.55□□□□□ -0.08
SPAST-203ENST00000615843 CENPVL3A0A0U1RRI6 287 aa14.55□□□□□ -0.08
SPAST-203ENST00000615843 hADV29S1A0JD25 119 aa14.55□□□□□ -0.08
SPAST-203ENST00000615843 ELANEP08246 267 aa14.55□□□□□ -0.08
SPAST-203ENST00000615843 BRWD1-AS2P59051 145 aa14.55□□□□□ -0.08
SPAST-203ENST00000615843 TM2D2Q9BX73 214 aa14.55□□□□□ -0.08
SPAST-203ENST00000615843 CRIP3Q6Q6R5 217 aa14.54□□□□□ -0.08
SPAST-203ENST00000615843 A0A096LPF7 62 aa14.54□□□□□ -0.08
SPAST-203ENST00000615843 MED14OSP0DP75 135 aa14.54□□□□□ -0.08
SPAST-203ENST00000615843 CRYGBP07316 175 aa14.54□□□□□ -0.08
SPAST-203ENST00000615843 MLST8Q9BVC4 326 aa14.54□□□□□ -0.08
SPAST-203ENST00000615843 Q8N1Y9 231 aa14.53□□□□□ -0.08
SPAST-203ENST00000615843 NOP10Q9NPE3 64 aaKnown RBP14.53□□□□□ -0.08
SPAST-203ENST00000615843 RNF223E7ERA6 249 aa14.52□□□□□ -0.08
SPAST-203ENST00000615843 FRMPD3Q5JV73 1810 aa14.52□□□□□ -0.09
SPAST-203ENST00000615843 PRB1P04280 392 aa14.52□□□□□ -0.09
SPAST-203ENST00000615843 LINC00643Q86TS7 51 aa14.52□□□□□ -0.09
SPAST-203ENST00000615843 PSCAO43653 123 aa14.51□□□□□ -0.09
SPAST-203ENST00000615843 PROP1O75360 226 aa14.51□□□□□ -0.09
SPAST-203ENST00000615843 UBE2DNLQ8IWF7 75 aa14.51□□□□□ -0.09
SPAST-203ENST00000615843 MAPK1IP1LQ8NDC0 245 aa14.51□□□□□ -0.09
SPAST-203ENST00000615843 COX7B2Q8TF08 81 aa14.5□□□□□ -0.09
SPAST-203ENST00000615843 ATP5G1P05496 136 aa14.5□□□□□ -0.09
SPAST-203ENST00000615843 LECT2O14960 151 aa14.5□□□□□ -0.09
SPAST-203ENST00000615843 NDUFC2O95298 119 aa14.5□□□□□ -0.09
SPAST-203ENST00000615843 AJUBAQ96IF1 538 aa14.5□□□□□ -0.09
SPAST-203ENST00000615843 RNF114Q9Y508 228 aa14.5□□□□□ -0.09
SPAST-203ENST00000615843 IGHV1-58A0A0C4DH39 117 aa14.49□□□□□ -0.09
SPAST-203ENST00000615843 ZNF80P51504 273 aaPredicted RBP14.49□□□□□ -0.09
SPAST-203ENST00000615843 IGLV1-47P01700 117 aa14.49□□□□□ -0.09
SPAST-203ENST00000615843 VSIG2Q96IQ7 327 aa14.49□□□□□ -0.09
SPAST-203ENST00000615843 OPRPNQ99935 248 aaPredicted RBP14.49□□□□□ -0.09
SPAST-203ENST00000615843 NCOA6Q14686 2063 aaPredicted RBP14.48□□□□□ -0.09
SPAST-203ENST00000615843 IGHV3-30-3P0DP02 117 aa14.48□□□□□ -0.09
SPAST-203ENST00000615843 HIST2H2BCQ6DN03 193 aa14.48□□□□□ -0.09
SPAST-203ENST00000615843 TMEM61Q8N0U2 210 aa14.48□□□□□ -0.09
SPAST-203ENST00000615843 Q8N9W7 124 aa14.48□□□□□ -0.09
SPAST-203ENST00000615843 K7ENP7 123 aa14.48□□□□□ -0.09
SPAST-203ENST00000615843 JMJD7-PLA2G4BH0Y9G9 81 aa14.47□□□□□ -0.09
SPAST-203ENST00000615843 C20orf203Q8NBC4 194 aa14.47□□□□□ -0.09
SPAST-203ENST00000615843 DKK4Q9UBT3 224 aa14.47□□□□□ -0.09
SPAST-203ENST00000615843 K7EQD1 137 aa14.46□□□□□ -0.09
SPAST-203ENST00000615843 IGLC6P0CF74 106 aa14.46□□□□□ -0.09
SPAST-203ENST00000615843 TEX49A0A1B0GTD5 131 aa14.46□□□□□ -0.09
SPAST-203ENST00000615843 IGKV2D-26A0A0A0MRZ7 120 aa14.46□□□□□ -0.09
SPAST-203ENST00000615843 DAZ2Q13117 558 aaKnown RBP14.46□□□□□ -0.09
SPAST-203ENST00000615843 DAZ4Q86SG3 579 aaKnown RBP14.46□□□□□ -0.09
SPAST-203ENST00000615843 DAZ3Q9NR90 486 aaKnown RBP14.46□□□□□ -0.09
SPAST-203ENST00000615843 RNF152Q8N8N0 203 aa14.46□□□□□ -0.1
SPAST-203ENST00000615843 NCKAP5O14513 1909 aa14.46□□□□□ -0.1
SPAST-203ENST00000615843 DEFB1P60022 68 aa14.45□□□□□ -0.1
SPAST-203ENST00000615843 MIAQ16674 131 aa14.45□□□□□ -0.1
SPAST-203ENST00000615843 ZGRF1Q86YA3 2104 aa14.45□□□□□ -0.1
SPAST-203ENST00000615843 Q6ZQT7 251 aa14.44□□□□□ -0.1
SPAST-203ENST00000615843 DEFB105AQ8NG35 78 aa14.44□□□□□ -0.1
SPAST-203ENST00000615843 APRG1Q8IVJ8 170 aa14.44□□□□□ -0.1
SPAST-203ENST00000615843 IGHV4-4A0A075B6R2 117 aa14.44□□□□□ -0.1
SPAST-203ENST00000615843 NFE4Q86UQ8 179 aa14.44□□□□□ -0.1
SPAST-203ENST00000615843 J3QLI3 93 aa14.43□□□□□ -0.1
SPAST-203ENST00000615843 ALPK3Q96L96 1907 aa14.43□□□□□ -0.1
SPAST-203ENST00000615843 FANCD2OSQ96PS1 177 aa14.43□□□□□ -0.1
SPAST-203ENST00000615843 MAPKAPK5-AS1Q8N8E1 139 aa14.43□□□□□ -0.1
SPAST-203ENST00000615843 A0A0J9YXY3 114 aa14.43□□□□□ -0.1
SPAST-203ENST00000615843 EIF4EBP1Q13541 118 aaPredicted RBP14.43□□□□□ -0.1
SPAST-203ENST00000615843 C5orf47Q569G3 176 aa14.43□□□□□ -0.1
SPAST-203ENST00000615843 C2orf91Q6ZV80 131 aa14.43□□□□□ -0.1
SPAST-203ENST00000615843 FREM1Q5H8C1 2179 aa14.42□□□□□ -0.1
SPAST-203ENST00000615843 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
SPAST-203ENST00000615843 FUSP35637 526 aaKnown RBP eCLIP14.42□□□□□ -0.1
SPAST-203ENST00000615843 NEXN-AS1Q8NBZ9 246 aa14.42□□□□□ -0.1
SPAST-203ENST00000615843 IGHV4-59P01825 116 aa14.42□□□□□ -0.1
SPAST-203ENST00000615843 UQCRQO14949 82 aa14.42□□□□□ -0.1
SPAST-203ENST00000615843 Q9HAA7 133 aa14.42□□□□□ -0.1
SPAST-203ENST00000615843 MSMPQ1L6U9 139 aa14.41□□□□□ -0.1
SPAST-203ENST00000615843 DEFB136Q30KP8 78 aa14.41□□□□□ -0.1
SPAST-203ENST00000615843 PLA2G2CQ5R387 149 aa14.41□□□□□ -0.1
SPAST-203ENST00000615843 MIR7-3HGQ8N6C7 128 aa14.41□□□□□ -0.1
SPAST-203ENST00000615843 C14orf132Q9NPU4 83 aa14.41□□□□□ -0.1
SPAST-203ENST00000615843 DEFB112Q30KQ8 113 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 A0A0J9YY99 117 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 GRNP28799 593 aaKnown RBP14.4□□□□□ -0.1
SPAST-203ENST00000615843 IGFL2Q6UWQ7 119 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 C5orf56Q8N8D9 126 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 NUP210Q8TEM1 1887 aaPredicted RBP14.4□□□□□ -0.1
SPAST-203ENST00000615843 CGB3P0DN86 165 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 CGB7P0DN87 165 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 BLCAPP62952 87 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 TRBV7-3A0A075B6L6 115 aa14.4□□□□□ -0.1
SPAST-203ENST00000615843 WT1P19544 449 aaPredicted RBP14.4□□□□□ -0.1
SPAST-203ENST00000615843 MDFICQ9P1T7 246 aa14.39□□□□□ -0.11
SPAST-203ENST00000615843 APOC4P55056 127 aa14.39□□□□□ -0.11
SPAST-203ENST00000615843 NREPQ16612 68 aa14.38□□□□□ -0.11
SPAST-203ENST00000615843 COX7A2LO14548 114 aa14.38□□□□□ -0.11
SPAST-203ENST00000615843 Q8N7P7 452 aa14.38□□□□□ -0.11
SPAST-203ENST00000615843 VPREB3Q9UKI3 123 aa14.38□□□□□ -0.11
SPAST-203ENST00000615843 SLURP1P55000 103 aa14.38□□□□□ -0.11
SPAST-203ENST00000615843 C1orf229Q6ZS94 237 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms