RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 LINC00315P59091 139 aa5.7□□□□□ -1.5
PCDH9-205ENST00000614931 UFSP1Q6NVU6 142 aa5.7□□□□□ -1.5
PCDH9-205ENST00000614931 RASL10AQ92737 203 aa5.7□□□□□ -1.5
PCDH9-205ENST00000614931 BORCS7Q96B45 105 aa5.7□□□□□ -1.5
PCDH9-205ENST00000614931 RNF185Q96GF1 192 aa5.7□□□□□ -1.5
PCDH9-205ENST00000614931 C11orf68Q9H3H3 251 aaKnown RBP5.7□□□□□ -1.5
PCDH9-205ENST00000614931 PHOX2AO14813 284 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 RS1O15537 224 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 GAS8-AS1O95177 125 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 IGHV3-53P01767 116 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 RAB5AP20339 215 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 SLAQ13239 276 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 CFAP126Q5VTH2 177 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 RASL11AQ6T310 242 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 AMN1Q8IY45 258 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 C14orf178Q8N769 122 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-205ENST00000614931 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 ZNF479Q96JC4 524 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 AP1S3Q96PC3 154 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 TMEM191AQ9H0A3 160 aa5.69□□□□□ -1.5
PCDH9-205ENST00000614931 RYR3Q15413 4870 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 IGHV3-73A0A0B4J1V6 119 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 A0A1B0GW15 77 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 LYRM9A8MSI8 78 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 SMKR1H3BMG3 65 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 DEFB130BP0DP73 79 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 DEFB130AP0DP74 79 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 RPS10P46783 165 aaKnown RBP5.68□□□□□ -1.5
PCDH9-205ENST00000614931 RAB4BP61018 213 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 LGALS9BQ3B8N2 356 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 KIAA1644Q3SXP7 199 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 MRPL51Q4U2R6 128 aaKnown RBP5.68□□□□□ -1.5
PCDH9-205ENST00000614931 PIK3CD-AS1Q5SR53 167 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 FAM74A4Q5TZK3 123 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 FAM104BQ5XKR9 115 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 Q6ZSN1 163 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 GNB1LQ9BYB4 327 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
PCDH9-205ENST00000614931 DPH3P1Q9H4G8 78 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 TENM2Q9NT68 2774 aa5.68□□□□□ -1.5
PCDH9-205ENST00000614931 TRAV26-2A0A0B4J265 109 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 TRAV4A0A0B4J268 109 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 NCR2O95944 276 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 S100A8P05109 93 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 MGPP08493 103 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 GATA1P15976 413 aaPredicted RBP5.67□□□□□ -1.5
PCDH9-205ENST00000614931 RAB4AP20338 218 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 C12orf74Q32Q52 190 aa5.67□□□□□ -1.5
PCDH9-205ENST00000614931 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 A8MWV9 139 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 TRGC2P03986 189 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 SPART-AS1P0CW21 52 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 P0DMU3 169 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 FAM231AP0DMU4 169 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 FAM231CP0DMU5 169 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 HOXA5P20719 270 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
PCDH9-205ENST00000614931 DAD1P61803 113 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 FABP9Q0Z7S8 132 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 COX19Q49B96 90 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 OR4C5Q8NGB2 326 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 C18orf15Q96N68 181 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 NDUFAF3Q9BU61 184 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 Q9UF83 564 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 TRAPPC1Q9Y5R8 145 aa5.66□□□□□ -1.5
PCDH9-205ENST00000614931 D6R8Y8 96 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 APCSP02743 223 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 MT-ND6P03923 174 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 FHL2Q14192 279 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 ZNF56Q15929 161 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 Q6ZTC4 211 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 NRACQ8N912 160 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 FRZBQ92765 325 aa5.65□□□□□ -1.5
PCDH9-205ENST00000614931 RPL39LQ96EH5 51 aaKnown RBP5.65□□□□□ -1.5
PCDH9-205ENST00000614931 LOC100131303A0A0U1RQF7 123 aa5.64□□□□□ -1.51
PCDH9-205ENST00000614931 M0QY20 66 aa5.64□□□□□ -1.51
PCDH9-205ENST00000614931 RHODO00212 210 aa5.64□□□□□ -1.51
PCDH9-205ENST00000614931 NPYP01303 97 aa5.64□□□□□ -1.51
PCDH9-205ENST00000614931 SMIM17P0DL12 118 aa5.64□□□□□ -1.51
PCDH9-205ENST00000614931 ZFP2Q6ZN57 461 aa5.64□□□□□ -1.51
PCDH9-205ENST00000614931 SMIM15Q7Z3B0 74 aa5.64□□□□□ -1.51
PCDH9-205ENST00000614931 ALKBH7Q9BT30 221 aaPredicted RBP5.64□□□□□ -1.51
PCDH9-205ENST00000614931 TEX48A0A1B0GUV7 120 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 F5H697 171 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 HTN3P15516 51 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 SRIP30626 198 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 IQCJQ1A5X6 159 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 CEMP1Q6PRD7 247 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-205ENST00000614931 SLC25A29Q8N8R3 303 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 NEXN-AS1Q8NBZ9 246 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 C11orf45Q8TAV5 145 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 MRAP2Q96G30 205 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 PRELID3AQ96N28 172 aa5.63□□□□□ -1.51
PCDH9-205ENST00000614931 CSMD3Q7Z407 3707 aa5.62□□□□□ -1.51
PCDH9-205ENST00000614931 TRGV4A0A0C4DH28 118 aa5.62□□□□□ -1.51
PCDH9-205ENST00000614931 NUPR2A6NF83 97 aa5.62□□□□□ -1.51
PCDH9-205ENST00000614931 K7EQD1 137 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms