RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 FANCD2OSQ96PS1 177 aa11.33□□□□□ -0.6
SNPH-203ENST00000614659 HERV-K104P63124 156 aa11.33□□□□□ -0.6
SNPH-203ENST00000614659 ATP5G1P05496 136 aa11.33□□□□□ -0.6
SNPH-203ENST00000614659 CRYGBP07316 175 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 CFHR3Q02985 330 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 F6UB75 175 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 ZGRF1Q86YA3 2104 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 DOCK11Q5JSL3 2073 aa11.32□□□□□ -0.6
SNPH-203ENST00000614659 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 DSCR8Q96T75 97 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 ZFP2Q6ZN57 461 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 WFDC11Q8NEX6 87 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 ICOSQ9Y6W8 199 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 TMEM258P61165 79 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 MRPL23Q16540 153 aaKnown RBP11.31□□□□□ -0.6
SNPH-203ENST00000614659 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 SHANK1Q9Y566 2161 aa11.31□□□□□ -0.6
SNPH-203ENST00000614659 LINC00173Q6ZV60 143 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 LRP4O75096 1905 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 IGHV4OR15-8A0A075B7B6 117 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 A0A087WW49 117 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 MBD6Q96DN6 1003 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 PKDREJQ9NTG1 2253 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 C2orf70A6NJV1 201 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 TAX1BP3O14907 124 aa11.3□□□□□ -0.6
SNPH-203ENST00000614659 GATA1P15976 413 aaPredicted RBP11.3□□□□□ -0.6
SNPH-203ENST00000614659 TNRC6AQ8NDV7 1962 aaKnown RBP11.29□□□□□ -0.6
SNPH-203ENST00000614659 IGHV3-38A0A0C4DH36 116 aa11.29□□□□□ -0.6
SNPH-203ENST00000614659 ODF3Q96PU9 254 aa11.29□□□□□ -0.6
SNPH-203ENST00000614659 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 BAALC-AS2P0C853 105 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 GTF3C1Q12789 2109 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 MSRB1Q9NZV6 116 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 TINCRA0A1B0GVN0 87 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 C11orf71Q6IPW1 123 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 RPL39LQ96EH5 51 aaKnown RBP11.28□□□□□ -0.6
SNPH-203ENST00000614659 U3KQE9 123 aa11.28□□□□□ -0.6
SNPH-203ENST00000614659 EBI3Q14213 229 aa11.27□□□□□ -0.6
SNPH-203ENST00000614659 TEN1Q86WV5 123 aa11.27□□□□□ -0.6
SNPH-203ENST00000614659 DAZ2Q13117 558 aaKnown RBP11.27□□□□□ -0.61
SNPH-203ENST00000614659 DAZ4Q86SG3 579 aaKnown RBP11.27□□□□□ -0.61
SNPH-203ENST00000614659 DAZ3Q9NR90 486 aaKnown RBP11.27□□□□□ -0.61
SNPH-203ENST00000614659 ROS1P08922 2347 aa11.27□□□□□ -0.61
SNPH-203ENST00000614659 E9PLD3 99 aa11.27□□□□□ -0.61
SNPH-203ENST00000614659 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
SNPH-203ENST00000614659 LY6LH3BQJ8 138 aa11.27□□□□□ -0.61
SNPH-203ENST00000614659 WISP2O76076 250 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 RBM3P98179 157 aaKnown RBP11.26□□□□□ -0.61
SNPH-203ENST00000614659 C1orf229Q6ZS94 237 aaPredicted RBP11.26□□□□□ -0.61
SNPH-203ENST00000614659 C11orf86A6NJI1 115 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 NXPH4O95158 308 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 SLC25A29Q8N8R3 303 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 CEP192Q8TEP8 1941 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 EML6Q6ZMW3 1958 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 LY6G6DO95868 133 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 NKAPP1Q8N9T2 125 aa11.26□□□□□ -0.61
SNPH-203ENST00000614659 NBASA2RRP1 2371 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 G3V4G9 280 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 ORMDL1Q9P0S3 153 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 IGLC6P0CF74 106 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 ODF1Q14990 250 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 K7EQD1 137 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 BAALCQ8WXS3 180 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
SNPH-203ENST00000614659 FXYD2P54710 66 aa11.24□□□□□ -0.61
SNPH-203ENST00000614659 C1orf43Q9BWL3 253 aa11.24□□□□□ -0.61
SNPH-203ENST00000614659 WFDC2Q14508 124 aa11.24□□□□□ -0.61
SNPH-203ENST00000614659 FOXI1Q12951 378 aa11.23□□□□□ -0.61
SNPH-203ENST00000614659 ATOX1O00244 68 aa11.23□□□□□ -0.61
SNPH-203ENST00000614659 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
SNPH-203ENST00000614659 RNASE13Q5GAN3 156 aaKnown RBP11.23□□□□□ -0.61
SNPH-203ENST00000614659 A0A0B4J2C4 111 aa11.23□□□□□ -0.61
SNPH-203ENST00000614659 IGF1P05019 195 aa11.23□□□□□ -0.61
SNPH-203ENST00000614659 COL5A1P20908 1838 aaPredicted RBP11.23□□□□□ -0.61
SNPH-203ENST00000614659 NCOA6Q14686 2063 aaPredicted RBP11.23□□□□□ -0.61
SNPH-203ENST00000614659 ATP6V0E2Q8NHE4 81 aa11.23□□□□□ -0.61
SNPH-203ENST00000614659 CCDC140Q96MF4 163 aa11.23□□□□□ -0.61
SNPH-203ENST00000614659 ANGP03950 147 aaKnown RBP11.22□□□□□ -0.61
SNPH-203ENST00000614659 Q9H8V8 135 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 J3KT08 172 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 APRG1Q8IVJ8 170 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 LGALS9O00182 355 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 POLEQ07864 2286 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 DOCK7Q96N67 2140 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 RS1O15537 224 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 LINC01620Q4KN68 170 aa11.22□□□□□ -0.61
SNPH-203ENST00000614659 Q8N1Y9 231 aa11.21□□□□□ -0.61
SNPH-203ENST00000614659 MUSTN1Q8IVN3 82 aa11.21□□□□□ -0.62
SNPH-203ENST00000614659 U3KQK5 164 aa11.21□□□□□ -0.62
SNPH-203ENST00000614659 PCDH15Q96QU1 1955 aa11.21□□□□□ -0.62
SNPH-203ENST00000614659 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.62
SNPH-203ENST00000614659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
SNPH-203ENST00000614659 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
SNPH-203ENST00000614659 A0A0J9YX75 114 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms