RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 SDHAF1A6NFY7 115 aa9.03□□□□□ -0.96
CDH5-208ENST00000614547 COX6CP09669 75 aa9.03□□□□□ -0.96
CDH5-208ENST00000614547 GATA3P23771 443 aa9.03□□□□□ -0.96
CDH5-208ENST00000614547 C8orf31Q8N9H6 132 aa9.03□□□□□ -0.96
CDH5-208ENST00000614547 KNCNA6PVL3 124 aa9.02□□□□□ -0.96
CDH5-208ENST00000614547 ZNF876PQ49A33 203 aa9.02□□□□□ -0.96
CDH5-208ENST00000614547 C2orf82Q6UX34 121 aa9.02□□□□□ -0.96
CDH5-208ENST00000614547 MRPS12O15235 138 aaKnown RBP9.02□□□□□ -0.97
CDH5-208ENST00000614547 IGFL2Q6UWQ7 119 aa9.02□□□□□ -0.97
CDH5-208ENST00000614547 TEN1Q86WV5 123 aa9.02□□□□□ -0.97
CDH5-208ENST00000614547 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.97
CDH5-208ENST00000614547 TMEM262E9PQX1 116 aa9.02□□□□□ -0.97
CDH5-208ENST00000614547 J3QQQ9 107 aa9.02□□□□□ -0.97
CDH5-208ENST00000614547 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
CDH5-208ENST00000614547 KLK9Q9UKQ9 250 aa9.02□□□□□ -0.97
CDH5-208ENST00000614547 HELZ2Q9BYK8 2649 aaKnown RBP9.02□□□□□ -0.97
CDH5-208ENST00000614547 FN1P02751 2386 aaKnown RBP9.02□□□□□ -0.97
CDH5-208ENST00000614547 TRAV8-3A0A0A6YYJ7 113 aa9.01□□□□□ -0.97
CDH5-208ENST00000614547 GATD1Q8NB37 220 aa9.01□□□□□ -0.97
CDH5-208ENST00000614547 Q6ZS46 218 aa9.01□□□□□ -0.97
CDH5-208ENST00000614547 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
CDH5-208ENST00000614547 IGHV3OR16-12A0A075B7B8 117 aa9.01□□□□□ -0.97
CDH5-208ENST00000614547 HOXB4P17483 251 aaPredicted RBP9.01□□□□□ -0.97
CDH5-208ENST00000614547 PMVKQ15126 192 aa9.01□□□□□ -0.97
CDH5-208ENST00000614547 NFE4Q86UQ8 179 aa9.01□□□□□ -0.97
CDH5-208ENST00000614547 RASL10AQ92737 203 aa9□□□□□ -0.97
CDH5-208ENST00000614547 DUX5Q96PT3 197 aa9□□□□□ -0.97
CDH5-208ENST00000614547 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
CDH5-208ENST00000614547 OVOL3O00110 214 aa9□□□□□ -0.97
CDH5-208ENST00000614547 PRR9Q5T870 116 aa9□□□□□ -0.97
CDH5-208ENST00000614547 MORN3Q6PF18 240 aaPredicted RBP9□□□□□ -0.97
CDH5-208ENST00000614547 NRACQ8N912 160 aa9□□□□□ -0.97
CDH5-208ENST00000614547 TRBV7-3A0A075B6L6 115 aa9□□□□□ -0.97
CDH5-208ENST00000614547 TRAV41A0A0B4J266 112 aa9□□□□□ -0.97
CDH5-208ENST00000614547 CD28P10747 220 aa9□□□□□ -0.97
CDH5-208ENST00000614547 Q8NA96 180 aa9□□□□□ -0.97
CDH5-208ENST00000614547 SPATA25Q9BR10 227 aa9□□□□□ -0.97
CDH5-208ENST00000614547 ITPR1Q14643 2758 aa9□□□□□ -0.97
CDH5-208ENST00000614547 VCYO14598 125 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 CDSNQ15517 529 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 RBAKDNA6NC62 111 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 K7ENP7 123 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 PAPPA-AS1Q5QFB9 102 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 NDUFA11Q86Y39 141 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 C15orf53Q8NAA6 179 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 USP24Q9UPU5 2620 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 TRBV12-3P01733 135 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 RHPN1-AS1Q9BWJ2 59 aa8.99□□□□□ -0.97
CDH5-208ENST00000614547 A0A0J9YXV3 536 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 RS1O15537 224 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 GAGE5Q13069 117 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 GAGE6Q13070 117 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 C9orf139Q6ZV77 190 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 MUSTN1Q8IVN3 82 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 CSMD2Q7Z408 3487 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 PRRC2AP48634 2157 aaKnown RBP8.98□□□□□ -0.97
CDH5-208ENST00000614547 CFAP126Q5VTH2 177 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 C10orf126Q8N4M7 172 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 DAND5Q8N907 189 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 FAM110DQ8TAY7 271 aaPredicted RBP8.98□□□□□ -0.97
CDH5-208ENST00000614547 ZANQ9Y493 2812 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 UNQ9165/PRO28630Q6UXU0 137 aa8.98□□□□□ -0.97
CDH5-208ENST00000614547 PPP1R17O96001 155 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 CFC1BP0CG36 223 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 CFC1P0CG37 223 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 TOMM6Q96B49 74 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 GNLYP22749 145 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 ID1P41134 155 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 Q8N9W7 124 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 SPINK13Q1W4C9 94 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 NEXN-AS1Q8NBZ9 246 aa8.97□□□□□ -0.97
CDH5-208ENST00000614547 F8W735 103 aaPredicted RBP8.96□□□□□ -0.97
CDH5-208ENST00000614547 OVOL1O14753 267 aa8.96□□□□□ -0.97
CDH5-208ENST00000614547 IGHG4P01861 327 aa8.96□□□□□ -0.97
CDH5-208ENST00000614547 CRIP2P52943 208 aaPredicted RBP8.96□□□□□ -0.97
CDH5-208ENST00000614547 KLRB1Q12918 225 aa8.96□□□□□ -0.97
CDH5-208ENST00000614547 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.97
CDH5-208ENST00000614547 MSRB2Q9Y3D2 182 aa8.96□□□□□ -0.97
CDH5-208ENST00000614547 IGHV7-4-1A0A0J9YVY3 117 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 TEX49A0A1B0GTD5 131 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 C20orf173Q96LM9 149 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 ZMAT4Q9H898 229 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 IGHV3-38A0A0C4DH36 116 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 M0R2P5 195 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 ZFP36P26651 326 aaKnown RBP8.96□□□□□ -0.98
CDH5-208ENST00000614547 TCTEX1D4Q5JR98 221 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 NPBQ8NG41 125 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 DUX3Q96PT4 197 aa8.96□□□□□ -0.98
CDH5-208ENST00000614547 SUMO4Q6EEV6 95 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 CEMP1Q6PRD7 247 aaPredicted RBP8.95□□□□□ -0.98
CDH5-208ENST00000614547 CCDC140Q96MF4 163 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 ANKRD17O75179 2603 aaKnown RBP8.95□□□□□ -0.98
CDH5-208ENST00000614547 GAGE12JA6NER3 117 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 GAGE7O76087 117 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 GAGE12FP0CL80 117 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 GAGE12GP0CL81 117 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 GAGE12IP0CL82 117 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 GAGE4Q13068 117 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 MAPK1IP1LQ8NDC0 245 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms