RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 C5orf56Q8N8D9 126 aa9.71□□□□□ -0.85
TNFAIP3-206ENST00000612899 PRAC2D3DTV9 90 aa9.71□□□□□ -0.86
TNFAIP3-206ENST00000612899 RBAKDNA6NC62 111 aa9.71□□□□□ -0.86
TNFAIP3-206ENST00000612899 INS-IGF2F8WCM5 200 aa9.71□□□□□ -0.86
TNFAIP3-206ENST00000612899 PLA2G5P39877 138 aa9.71□□□□□ -0.86
TNFAIP3-206ENST00000612899 CRIP3Q6Q6R5 217 aa9.71□□□□□ -0.86
TNFAIP3-206ENST00000612899 CEND1Q8N111 149 aa9.71□□□□□ -0.86
TNFAIP3-206ENST00000612899 TMEM131Q92545 1883 aa9.7□□□□□ -0.86
TNFAIP3-206ENST00000612899 NXPH4O95158 308 aa9.7□□□□□ -0.86
TNFAIP3-206ENST00000612899 FBXL19-AS1Q494R0 122 aa9.7□□□□□ -0.86
TNFAIP3-206ENST00000612899 NOP10Q9NPE3 64 aaKnown RBP9.7□□□□□ -0.86
TNFAIP3-206ENST00000612899 U3KQE9 123 aa9.7□□□□□ -0.86
TNFAIP3-206ENST00000612899 WFDC2Q14508 124 aa9.7□□□□□ -0.86
TNFAIP3-206ENST00000612899 DEFB1P60022 68 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 ZNF493Q6ZR52 646 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 J3QQQ9 107 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 CRYGCP07315 174 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 CGB3P0DN86 165 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 CGB7P0DN87 165 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 BRWD1-AS2P59051 145 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 TEN1Q86WV5 123 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 IGF2BP2-AS1Q96M15 143 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 TMEM258P61165 79 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 C11orf1Q9H5F2 150 aa9.69□□□□□ -0.86
TNFAIP3-206ENST00000612899 KLF5Q13887 457 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 DAZAP2Q15038 168 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 ZNF106Q9H2Y7 1883 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 LINC00173Q6ZV60 143 aa9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 RPL39LQ96EH5 51 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 FRMD6-AS1P0C7T7 363 aa9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 GTSF1Q8WW33 167 aa9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 TANC2Q9HCD6 1990 aa9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 C12orf74Q32Q52 190 aa9.68□□□□□ -0.86
TNFAIP3-206ENST00000612899 APOC4P55056 127 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 Q6ZUT4 128 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 FANCD2OSQ96PS1 177 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 CLPSL2Q6UWE3 100 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 SCRT2Q9NQ03 307 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 IGLL5B9A064 214 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 P0C879 139 aa9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 NDUFV3P56181 108 aaKnown RBP9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 FN1P02751 2386 aaKnown RBP9.67□□□□□ -0.86
TNFAIP3-206ENST00000612899 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 K7ERJ3 54 aa9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 ANKRD29Q8N6D5 301 aa9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 SIRPDQ9H106 197 aa9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 KIAA1549LQ6ZVL6 1849 aa9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 FGF6P10767 208 aa9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-206ENST00000612899 IGHV4OR15-8A0A075B7B6 117 aa9.65□□□□□ -0.86
TNFAIP3-206ENST00000612899 A0A087WW49 117 aa9.65□□□□□ -0.86
TNFAIP3-206ENST00000612899 ACYP1P07311 99 aa9.65□□□□□ -0.86
TNFAIP3-206ENST00000612899 MRAPQ8TCY5 172 aa9.65□□□□□ -0.86
TNFAIP3-206ENST00000612899 ARHGAP32A7KAX9 2087 aa9.65□□□□□ -0.86
TNFAIP3-206ENST00000612899 A0A0J9YY99 117 aa9.65□□□□□ -0.86
TNFAIP3-206ENST00000612899 ATP5G1P05496 136 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 PRO1854Q9UHT4 67 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 M0QXV9 152 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 IGHG4P01861 327 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 UNQ9165/PRO28630Q6UXU0 137 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 IGKV1D-37A0A075B6S9 117 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 ATOX1O00244 68 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 IGHG2P01859 326 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 SPATA25Q9BR10 227 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 RHOHQ15669 191 aa9.64□□□□□ -0.87
TNFAIP3-206ENST00000612899 TRBV12-3P01733 135 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 ZNF503Q96F45 646 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 LMO4P61968 165 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 HERVK_113P63121 156 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 SUMO4Q6EEV6 95 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 ZNF295-AS1Q8N0V1 137 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 YPEL4Q96NS1 127 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 C2orf70A6NJV1 201 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 OVOL2Q9BRP0 275 aa9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-206ENST00000612899 LINC01548A6NM66 108 aa9.62□□□□□ -0.87
TNFAIP3-206ENST00000612899 NTN5Q8WTR8 489 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-206ENST00000612899 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
TNFAIP3-206ENST00000612899 PRRC2AP48634 2157 aaKnown RBP9.62□□□□□ -0.87
TNFAIP3-206ENST00000612899 Q8N1Y9 231 aa9.62□□□□□ -0.87
TNFAIP3-206ENST00000612899 XCL1P47992 114 aa9.62□□□□□ -0.87
TNFAIP3-206ENST00000612899 C19orf84I3L1E1 186 aa9.61□□□□□ -0.87
TNFAIP3-206ENST00000612899 LINC00574Q9H8X3 128 aa9.61□□□□□ -0.87
TNFAIP3-206ENST00000612899 K7EMI3 77 aa9.61□□□□□ -0.87
TNFAIP3-206ENST00000612899 HIGD1BQ9P298 99 aa9.61□□□□□ -0.87
TNFAIP3-206ENST00000612899 PKD1L2Q7Z442 2459 aa9.61□□□□□ -0.87
TNFAIP3-206ENST00000612899 MT-ATP8P03928 68 aa9.61□□□□□ -0.87
TNFAIP3-206ENST00000612899 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms