RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LGALS1P09382 135 aaKnown RBP10.58□□□□□ -0.72
COL6A1-207ENST00000612273 DOPEY1Q5JWR5 2465 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 A0A1B0GWB2 263 aa10.57□□□□□ -0.72
COL6A1-207ENST00000612273 FOXI2Q6ZQN5 318 aa10.57□□□□□ -0.72
COL6A1-207ENST00000612273 IGHV4-30-2A0A087WSY4 118 aa10.57□□□□□ -0.72
COL6A1-207ENST00000612273 C11orf86A6NJI1 115 aa10.57□□□□□ -0.72
COL6A1-207ENST00000612273 TMEM238C9JI98 176 aa10.57□□□□□ -0.72
COL6A1-207ENST00000612273 ZNF56Q15929 161 aa10.57□□□□□ -0.72
COL6A1-207ENST00000612273 NEXN-AS1Q8NBZ9 246 aa10.57□□□□□ -0.72
COL6A1-207ENST00000612273 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 OVOL1O14753 267 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 TOMM6Q96B49 74 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 MDFICQ9P1T7 246 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 ZNF462Q96JM2 2506 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 E9PLD3 99 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 AVPP01185 164 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 SPINK13Q1W4C9 94 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 PTH2Q96A98 100 aa10.56□□□□□ -0.72
COL6A1-207ENST00000612273 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 NDUFA4O00483 81 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
COL6A1-207ENST00000612273 PSMB2P49721 201 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 UCNP55089 124 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 ZFP2Q6ZN57 461 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 GAGE13Q4V321 117 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 MRPL53Q96EL3 112 aaKnown RBP10.55□□□□□ -0.72
COL6A1-207ENST00000612273 NF1P21359 2839 aa10.55□□□□□ -0.72
COL6A1-207ENST00000612273 IGSF10Q6WRI0 2623 aa10.54□□□□□ -0.72
COL6A1-207ENST00000612273 SUMO4Q6EEV6 95 aa10.54□□□□□ -0.72
COL6A1-207ENST00000612273 CCL19Q99731 98 aa10.54□□□□□ -0.72
COL6A1-207ENST00000612273 DAZ1Q9NQZ3 744 aaKnown RBP10.54□□□□□ -0.72
COL6A1-207ENST00000612273 AZU1P20160 251 aa10.54□□□□□ -0.72
COL6A1-207ENST00000612273 RRN3P1Q2M238 152 aa10.54□□□□□ -0.72
COL6A1-207ENST00000612273 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
COL6A1-207ENST00000612273 SOCS3O14543 225 aa10.53□□□□□ -0.72
COL6A1-207ENST00000612273 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
COL6A1-207ENST00000612273 PRRC2AP48634 2157 aaKnown RBP10.53□□□□□ -0.72
COL6A1-207ENST00000612273 TEX15Q9BXT5 2789 aa10.53□□□□□ -0.72
COL6A1-207ENST00000612273 IGHV4-4A0A075B6R2 117 aa10.53□□□□□ -0.72
COL6A1-207ENST00000612273 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
COL6A1-207ENST00000612273 ADARB2-AS1A8MUL3 147 aa10.53□□□□□ -0.72
COL6A1-207ENST00000612273 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
COL6A1-207ENST00000612273 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-207ENST00000612273 IGHV4-59P01825 116 aa10.52□□□□□ -0.72
COL6A1-207ENST00000612273 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.72
COL6A1-207ENST00000612273 CLEC2AQ6UVW9 174 aa10.52□□□□□ -0.72
COL6A1-207ENST00000612273 PIMREGQ9BSJ6 248 aa10.52□□□□□ -0.72
COL6A1-207ENST00000612273 KNCNA6PVL3 124 aa10.52□□□□□ -0.73
COL6A1-207ENST00000612273 TSHBP01222 138 aa10.52□□□□□ -0.73
COL6A1-207ENST00000612273 CRYGDP07320 174 aa10.52□□□□□ -0.73
COL6A1-207ENST00000612273 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
COL6A1-207ENST00000612273 SPANXB1Q9NS25 103 aaPredicted RBP10.52□□□□□ -0.73
COL6A1-207ENST00000612273 MTORP42345 2549 aa10.52□□□□□ -0.73
COL6A1-207ENST00000612273 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
COL6A1-207ENST00000612273 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
COL6A1-207ENST00000612273 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
COL6A1-207ENST00000612273 NIPBLQ6KC79 2804 aaeCLIP10.51□□□□□ -0.73
COL6A1-207ENST00000612273 CHD6Q8TD26 2715 aa10.51□□□□□ -0.73
COL6A1-207ENST00000612273 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
COL6A1-207ENST00000612273 IGHG2P01859 326 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 P0DMU3 169 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 FAM231AP0DMU4 169 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 FAM231CP0DMU5 169 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 ZNF580Q9UK33 172 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 Q8N1Y9 231 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 LENEPQ9Y5L5 61 aa10.5□□□□□ -0.73
COL6A1-207ENST00000612273 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
COL6A1-207ENST00000612273 DUX3Q96PT4 197 aa10.49□□□□□ -0.73
COL6A1-207ENST00000612273 LINC00315P59091 139 aa10.49□□□□□ -0.73
COL6A1-207ENST00000612273 USMG5Q96IX5 58 aa10.49□□□□□ -0.73
COL6A1-207ENST00000612273 PROK1P58294 105 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 DEFB136Q30KP8 78 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 C19orf54Q5BKX5 351 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 ZNRF2Q8NHG8 242 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 BEX4Q9NWD9 120 aaPredicted RBP10.48□□□□□ -0.73
COL6A1-207ENST00000612273 PRSS47A8MTI9 375 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 F8W1H4 67 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 ID1P41134 155 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 NPC2P61916 151 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 KHDC1LQ5JSQ8 128 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 SIGMAR1Q99720 223 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 ACANP16112 2415 aa10.48□□□□□ -0.73
COL6A1-207ENST00000612273 IGLV4-69A0A075B6H9 119 aa10.47□□□□□ -0.73
COL6A1-207ENST00000612273 TRAV2A0A0B4J234 112 aa10.47□□□□□ -0.73
COL6A1-207ENST00000612273 MSMBP08118 114 aa10.47□□□□□ -0.73
COL6A1-207ENST00000612273 PMVKQ15126 192 aa10.47□□□□□ -0.73
COL6A1-207ENST00000612273 A6NDX4 124 aa10.47□□□□□ -0.73
COL6A1-207ENST00000612273 J3QR89 54 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 VCYO14598 125 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 HERVK_113P61574 105 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 DEFB112Q30KQ8 113 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 DCANP1Q8TF63 244 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 Q9UF83 564 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 TSPAN13O95857 204 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms