RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 VWC2LB2RUY7 222 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 RNF223E7ERA6 249 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 SOCS3O14543 225 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 CRIP1P50238 77 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 C9orf153Q5TBE3 101 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 TM2D2Q9BX73 214 aa8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
CDC42EP3-206ENST00000611976 LY6LH3BQJ8 138 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 HOXD3P31249 432 aaPredicted RBP8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 EDA2RQ9HAV5 297 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 TECTAO75443 2155 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 RPL39P62891 51 aaKnown RBP8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 Q8N976 141 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 HCFC1P51610 2035 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 RBX1P62877 108 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 CCDC140Q96MF4 163 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 LAMTOR3Q9UHA4 124 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 VPREB3Q9UKI3 123 aa8.36□□□□□ -1.07
CDC42EP3-206ENST00000611976 ABCA4P78363 2273 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 ACYP1P07311 99 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 HERV-K104P63124 156 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 Q8NA96 180 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 KIAA1549Q9HCM3 1950 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 TNCP24821 2201 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 EXPH5Q8NEV8 1989 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 GAGE7O76087 117 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 GAGE12FP0CL80 117 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 GAGE12GP0CL81 117 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 GAGE12IP0CL82 117 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 IGHV4-61A0A0C4DH41 118 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 IGKV2-29A2NJV5 120 aaPredicted RBP8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 IGHV4-38-2P0DP08 117 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 DEFB112Q30KQ8 113 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
CDC42EP3-206ENST00000611976 IGHV4-59P01825 116 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 CHD9Q3L8U1 2897 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 IGHG2P01859 326 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 Q9H8V8 135 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 GPHB5Q86YW7 130 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 Q8N1Y9 231 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 BLCAPP62952 87 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 C2orf91Q6ZV80 131 aa8.34□□□□□ -1.07
CDC42EP3-206ENST00000611976 DEFB130BP0DP73 79 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 DEFB130AP0DP74 79 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 CRYBA4P53673 196 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 GAGE6Q13070 117 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 EBI3Q14213 229 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 RNF185Q96GF1 192 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 PRO3102Q9H379 93 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 U3KQE9 123 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 CUL9Q8IWT3 2517 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 TMEM89A2RUT3 159 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 NDUFA11Q86Y39 141 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 PFN2P35080 140 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 NEXN-AS1Q8NBZ9 246 aa8.33□□□□□ -1.08
CDC42EP3-206ENST00000611976 UNQ9165/PRO28630Q6UXU0 137 aa8.32□□□□□ -1.08
CDC42EP3-206ENST00000611976 SLC25A29Q8N8R3 303 aa8.32□□□□□ -1.08
CDC42EP3-206ENST00000611976 CFHR3Q02985 330 aa8.32□□□□□ -1.08
CDC42EP3-206ENST00000611976 MAPK1IP1LQ8NDC0 245 aa8.32□□□□□ -1.08
CDC42EP3-206ENST00000611976 C10orf105Q8TEF2 133 aa8.32□□□□□ -1.08
CDC42EP3-206ENST00000611976 A0A0C4DFX4 3053 aa8.32□□□□□ -1.08
CDC42EP3-206ENST00000611976 C20orf203Q8NBC4 194 aa8.31□□□□□ -1.08
CDC42EP3-206ENST00000611976 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
CDC42EP3-206ENST00000611976 CACNA1BQ00975 2339 aa8.31□□□□□ -1.08
CDC42EP3-206ENST00000611976 SMAD5-AS1Q9Y6J3 95 aa8.31□□□□□ -1.08
CDC42EP3-206ENST00000611976 MUC6Q6W4X9 2439 aa8.31□□□□□ -1.08
CDC42EP3-206ENST00000611976 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
CDC42EP3-206ENST00000611976 SZT2Q5T011 3432 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 SPTAN1Q13813 2472 aaKnown RBP8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 SPANXB1Q9NS25 103 aaPredicted RBP8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 BAALC-AS2P0C853 105 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 ODF3Q96PU9 254 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 H3BT86 120 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 DEFB1P60022 68 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 URB1-AS1Q96HZ7 61 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 SPANXCQ9NY87 97 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
CDC42EP3-206ENST00000611976 A0A0J9YX75 114 aa8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 TRBV12-3P01733 135 aa8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 DAZ2Q13117 558 aaKnown RBP8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 IGHV1-58A0A0C4DH39 117 aa8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 UBL5Q9BZL1 73 aa8.29□□□□□ -1.08
CDC42EP3-206ENST00000611976 A0A0B4J2C4 111 aa8.28□□□□□ -1.08
CDC42EP3-206ENST00000611976 A6NDX4 124 aa8.28□□□□□ -1.08
CDC42EP3-206ENST00000611976 K7EQD1 137 aa8.28□□□□□ -1.08
CDC42EP3-206ENST00000611976 B5MCH6 92 aa8.28□□□□□ -1.08
CDC42EP3-206ENST00000611976 TCL1BO95988 128 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms