RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PAM16Q9Y3D7 125 aa6.45□□□□□ -1.38
SMAD4-217ENST00000611848 IGHV4-4A0A075B6R2 117 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 SPRY2O43597 315 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 SNAI2O43623 268 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 MRPL52Q86TS9 123 aaKnown RBP6.44□□□□□ -1.38
SMAD4-217ENST00000611848 ZFAND2AQ8N6M9 145 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 OR10J6PQ8NGY7 276 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 RNF183Q96D59 192 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 RNF185Q96GF1 192 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 OVOL2Q9BRP0 275 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 AP5S1Q9NUS5 200 aa6.44□□□□□ -1.38
SMAD4-217ENST00000611848 MUC21A0A0G2JKD1 596 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 A0A0J9YX75 114 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 MUC21A0A140T8X8 626 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 C20orf202A1L168 122 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 PPBPP02775 128 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 DEFB135Q30KP9 77 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 SPATA45Q537H7 98 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 PRR9Q5T870 116 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 LINC00173Q6ZV60 143 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 FA2HQ7L5A8 372 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 SPATA12Q7Z6I5 190 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 PRSS3P2Q8NHM4 247 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 WWC2-AS2Q96NR7 200 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 RETNQ9HD89 108 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 HSPB8Q9UJY1 196 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 LINC01546A6NGU7 62 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 DUSP14O95147 198 aaKnown RBP6.43□□□□□ -1.38
SMAD4-217ENST00000611848 CKS2P33552 79 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 IFI27P40305 119 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-217ENST00000611848 DEFB1P60022 68 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 SSTP61278 116 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 PET117Q6UWS5 81 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 OR8A1Q8NGG7 326 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 C1QTNF4Q9BXJ3 329 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 LAMTOR2Q9Y2Q5 125 aa6.43□□□□□ -1.38
SMAD4-217ENST00000611848 TRAV9-2A0A087WT02 112 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 A0A096LNJ9 63 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 TRAV21A0A0B4J279 112 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 A8MTW9 85 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 F6UB75 175 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 NPYP01303 97 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 GIG44P09565 113 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-217ENST00000611848 IGLC3P0DOY3 106 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 CACNG7P62955 275 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 Q6ZQT7 251 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 OR10AG1Q8NH19 301 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 SNHG12Q9BXW3 62 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 MAP1LC3CQ9BXW4 147 aa6.42□□□□□ -1.38
SMAD4-217ENST00000611848 M0R143 59 aa6.41□□□□□ -1.38
SMAD4-217ENST00000611848 IGKV3-20P01619 116 aa6.41□□□□□ -1.38
SMAD4-217ENST00000611848 ZNF705AQ6ZN79 300 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-217ENST00000611848 DNAH7Q8WXX0 4024 aa6.41□□□□□ -1.38
SMAD4-217ENST00000611848 LOC389332A0A1B0GUA5 103 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 PRSS47A8MTI9 375 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 SMKR1H3BMG3 65 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 MED14OSP0DP75 135 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 ATOH7Q8N100 152 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 EDA2RQ9HAV5 297 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 SCRT2Q9NQ03 307 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 XCL2Q9UBD3 114 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
SMAD4-217ENST00000611848 KLLNB2CW77 178 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 TNFRSF6BO95407 300 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 NCR2O95944 276 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 MAJINQ3KP22 176 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 AMTNQ6UX39 209 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 SMIM15Q7Z3B0 74 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 CSNK1G2-AS1Q8NCQ2 148 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 OR11H2Q8NH07 326 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 ODF3Q96PU9 254 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 MAP1LC3AQ9H492 121 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 GAS8-AS1O95177 125 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 EVI2AP22794 236 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 RNASE4P34096 147 aaKnown RBP6.39□□□□□ -1.39
SMAD4-217ENST00000611848 FXYD7P58549 80 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
SMAD4-217ENST00000611848 NXT2Q9NPJ8 142 aaKnown RBP6.39□□□□□ -1.39
SMAD4-217ENST00000611848 IGLV2-18A0A075B6J9 118 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 A0A1B0GV90 55 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 H3BVH4 76 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 HBDP02042 147 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 ASIPP42127 132 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 ANXA2RQ3ZCQ2 193 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 SPANXN1Q5VSR9 72 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 NRACQ8N912 160 aa6.38□□□□□ -1.39
SMAD4-217ENST00000611848 A0A0J9YWU9 116 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 J3KRW8 73 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 NXPH4O95158 308 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 MIFP14174 115 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 TSPOP30536 169 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 CDKN1BP46527 198 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 KIR3DS1Q14943 382 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 SPINK13Q1W4C9 94 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms