RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 FAM74A4Q5TZK3 123 aa12.83□□□□□ -0.36
NEK3-206ENST00000611833 KIR2DL4Q99706 377 aa12.83□□□□□ -0.36
NEK3-206ENST00000611833 TP53TG1Q9Y2A0 90 aa12.83□□□□□ -0.36
NEK3-206ENST00000611833 C21orf62-AS1Q17RA5 79 aa12.83□□□□□ -0.36
NEK3-206ENST00000611833 IGHV3-16A0A0C4DH30 117 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
NEK3-206ENST00000611833 ZFP2Q6ZN57 461 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 DUX5Q96PT3 197 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 MDFICQ9P1T7 246 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 POLQO75417 2590 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
NEK3-206ENST00000611833 COX6B1P14854 86 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 SYT8Q8NBV8 401 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 PHLDA1Q8WV24 401 aaPredicted RBP12.82□□□□□ -0.36
NEK3-206ENST00000611833 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
NEK3-206ENST00000611833 VPREB3Q9UKI3 123 aa12.82□□□□□ -0.36
NEK3-206ENST00000611833 SDHAF1A6NFY7 115 aa12.81□□□□□ -0.36
NEK3-206ENST00000611833 SCGB2A2Q13296 93 aa12.81□□□□□ -0.36
NEK3-206ENST00000611833 SPINK13Q1W4C9 94 aa12.81□□□□□ -0.36
NEK3-206ENST00000611833 C9orf85Q96MD7 179 aa12.81□□□□□ -0.36
NEK3-206ENST00000611833 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
NEK3-206ENST00000611833 E9PLD3 99 aa12.8□□□□□ -0.36
NEK3-206ENST00000611833 Q8N1Y9 231 aa12.8□□□□□ -0.36
NEK3-206ENST00000611833 PRADC1Q9BSG0 188 aa12.8□□□□□ -0.36
NEK3-206ENST00000611833 ZNF56Q15929 161 aa12.8□□□□□ -0.36
NEK3-206ENST00000611833 USP24Q9UPU5 2620 aa12.8□□□□□ -0.36
NEK3-206ENST00000611833 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 LGALS9O00182 355 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 FSHBP01225 129 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 ELANEP08246 267 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 HOXD3P31249 432 aaPredicted RBP12.79□□□□□ -0.36
NEK3-206ENST00000611833 Q6YL49 198 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 ZFYVE26Q68DK2 2539 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 ZNF462Q96JM2 2506 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 CRYGDP07320 174 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 RPL39P62891 51 aaKnown RBP12.79□□□□□ -0.36
NEK3-206ENST00000611833 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 ZNF702PQ9H963 129 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 DOPEY2Q9Y3R5 2298 aa12.79□□□□□ -0.36
NEK3-206ENST00000611833 FAM208BQ5VWN6 2430 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 IGIPA6NJ69 53 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 SAP30O75446 220 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 TSHBP01222 138 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 IGHV4-31P0DP07 118 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 TRBV7-3A0A075B6L6 115 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 KRTAP10-9P60411 292 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 PMVKQ15126 192 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 TMEM141Q96I45 108 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 ZNF256Q9Y2P7 627 aaPredicted RBP12.78□□□□□ -0.36
NEK3-206ENST00000611833 MXRA5Q9NR99 2828 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 CR1P17927 2039 aa12.78□□□□□ -0.36
NEK3-206ENST00000611833 CENPEQ02224 2701 aa12.77□□□□□ -0.36
NEK3-206ENST00000611833 ZNF815PA8K554 130 aa12.77□□□□□ -0.36
NEK3-206ENST00000611833 IGLL5B9A064 214 aa12.77□□□□□ -0.36
NEK3-206ENST00000611833 EMP1P54849 157 aa12.77□□□□□ -0.36
NEK3-206ENST00000611833 CD300EQ496F6 205 aaPredicted RBP12.77□□□□□ -0.36
NEK3-206ENST00000611833 UBE2E2Q96LR5 201 aa12.77□□□□□ -0.36
NEK3-206ENST00000611833 TRBV27A0A0K0K1C4 114 aa12.77□□□□□ -0.37
NEK3-206ENST00000611833 LINC01619G3V211 115 aa12.77□□□□□ -0.37
NEK3-206ENST00000611833 PAPPA-AS1Q5QFB9 102 aa12.77□□□□□ -0.37
NEK3-206ENST00000611833 BEX4Q9NWD9 120 aaPredicted RBP12.77□□□□□ -0.37
NEK3-206ENST00000611833 TRBV6-5A0A0K0K1A5 114 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 C11orf86A6NJI1 115 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 HOXA3O43365 443 aaPredicted RBP12.76□□□□□ -0.37
NEK3-206ENST00000611833 SCGB1D4Q6XE38 83 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 ZNF479Q96JC4 524 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 AGRNO00468 2067 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 HERVK_113P61574 105 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 TIMM17AQ99595 171 aa12.76□□□□□ -0.37
NEK3-206ENST00000611833 UBR5O95071 2799 aaPredicted RBP12.75□□□□□ -0.37
NEK3-206ENST00000611833 IGLV4-69A0A075B6H9 119 aa12.75□□□□□ -0.37
NEK3-206ENST00000611833 M0QY20 66 aa12.75□□□□□ -0.37
NEK3-206ENST00000611833 TCTEX1D4Q5JR98 221 aa12.75□□□□□ -0.37
NEK3-206ENST00000611833 LRRK2Q5S007 2527 aa12.75□□□□□ -0.37
NEK3-206ENST00000611833 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
NEK3-206ENST00000611833 ZNF876PQ49A33 203 aa12.74□□□□□ -0.37
NEK3-206ENST00000611833 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
NEK3-206ENST00000611833 MORN3Q6PF18 240 aaPredicted RBP12.73□□□□□ -0.37
NEK3-206ENST00000611833 KLHL30-AS1Q8NEE0 82 aa12.73□□□□□ -0.37
NEK3-206ENST00000611833 TRGV11A0A075B6L2 103 aa12.73□□□□□ -0.37
NEK3-206ENST00000611833 HTN1P15515 57 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
NEK3-206ENST00000611833 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 ZNF843Q8N446 348 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 RNF152Q8N8N0 203 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 SLURP1P55000 103 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 DEFB136Q30KP8 78 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
NEK3-206ENST00000611833 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
NEK3-206ENST00000611833 KNCNA6PVL3 124 aa12.71□□□□□ -0.37
NEK3-206ENST00000611833 G3V4G9 280 aa12.71□□□□□ -0.38
NEK3-206ENST00000611833 RHOHQ15669 191 aa12.71□□□□□ -0.38
NEK3-206ENST00000611833 RRN3P1Q2M238 152 aa12.71□□□□□ -0.38
NEK3-206ENST00000611833 Q5PR19 223 aa12.71□□□□□ -0.38
NEK3-206ENST00000611833 SORL1Q92673 2214 aa12.7□□□□□ -0.38
NEK3-206ENST00000611833 A0A1B0GWB2 263 aa12.7□□□□□ -0.38
NEK3-206ENST00000611833 DEFB131AP59861 70 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms