RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 TRAV4A0A0B4J268 109 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 COLCA2A8K830 154 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 CIDEAO60543 219 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 UFSP1Q6NVU6 142 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 JPT2Q9H910 190 aa11.34□□□□□ -0.59
CLTCL1-207ENST00000611723 EVI2AP22794 236 aa11.33□□□□□ -0.6
CLTCL1-207ENST00000611723 CAMPP49913 170 aa11.33□□□□□ -0.6
CLTCL1-207ENST00000611723 LINC00315P59091 139 aa11.33□□□□□ -0.6
CLTCL1-207ENST00000611723 ZFP2Q6ZN57 461 aa11.33□□□□□ -0.6
CLTCL1-207ENST00000611723 SMIM15Q7Z3B0 74 aa11.33□□□□□ -0.6
CLTCL1-207ENST00000611723 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 DAD1P61803 113 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 C12orf74Q32Q52 190 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 GNB1LQ9BYB4 327 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 SAMD10Q9BYL1 202 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 NACAE9PAV3 2078 aa11.32□□□□□ -0.6
CLTCL1-207ENST00000611723 RHODO00212 210 aa11.31□□□□□ -0.6
CLTCL1-207ENST00000611723 SMIM17P0DL12 118 aa11.31□□□□□ -0.6
CLTCL1-207ENST00000611723 FAM104BQ5XKR9 115 aa11.31□□□□□ -0.6
CLTCL1-207ENST00000611723 C11orf45Q8TAV5 145 aa11.31□□□□□ -0.6
CLTCL1-207ENST00000611723 U3KQK5 164 aa11.31□□□□□ -0.6
CLTCL1-207ENST00000611723 COL7A1Q02388 2944 aa11.3□□□□□ -0.6
CLTCL1-207ENST00000611723 A0A087WWL8 130 aa11.3□□□□□ -0.6
CLTCL1-207ENST00000611723 RNF185Q96GF1 192 aa11.3□□□□□ -0.6
CLTCL1-207ENST00000611723 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
CLTCL1-207ENST00000611723 WWC2-AS2Q96NR7 200 aa11.3□□□□□ -0.6
CLTCL1-207ENST00000611723 EDA2RQ9HAV5 297 aa11.3□□□□□ -0.6
CLTCL1-207ENST00000611723 RAB4AP20338 218 aa11.29□□□□□ -0.6
CLTCL1-207ENST00000611723 FRZBQ92765 325 aa11.29□□□□□ -0.6
CLTCL1-207ENST00000611723 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
CLTCL1-207ENST00000611723 MT-ND6P03923 174 aa11.28□□□□□ -0.6
CLTCL1-207ENST00000611723 RAB4BP61018 213 aa11.28□□□□□ -0.6
CLTCL1-207ENST00000611723 FHL2Q14192 279 aa11.28□□□□□ -0.6
CLTCL1-207ENST00000611723 AMN1Q8IY45 258 aa11.28□□□□□ -0.6
CLTCL1-207ENST00000611723 ATP5G1P05496 136 aa11.27□□□□□ -0.61
CLTCL1-207ENST00000611723 RAB5AP20339 215 aa11.27□□□□□ -0.61
CLTCL1-207ENST00000611723 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
CLTCL1-207ENST00000611723 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
CLTCL1-207ENST00000611723 GATA1P15976 413 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-207ENST00000611723 NANOS2P60321 138 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-207ENST00000611723 MRPL51Q4U2R6 128 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-207ENST00000611723 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
CLTCL1-207ENST00000611723 STAB2Q8WWQ8 2551 aa11.26□□□□□ -0.61
CLTCL1-207ENST00000611723 IGHV3-73A0A0B4J1V6 119 aa11.25□□□□□ -0.61
CLTCL1-207ENST00000611723 APCSP02743 223 aa11.25□□□□□ -0.61
CLTCL1-207ENST00000611723 SLAQ13239 276 aa11.25□□□□□ -0.61
CLTCL1-207ENST00000611723 Q6ZSN1 163 aa11.25□□□□□ -0.61
CLTCL1-207ENST00000611723 MRAP2Q96G30 205 aa11.25□□□□□ -0.61
CLTCL1-207ENST00000611723 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-207ENST00000611723 TRGV4A0A0C4DH28 118 aa11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 F5H697 171 aa11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 MGPP08493 103 aa11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 HOXA5P20719 270 aa11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 RPS10P46783 165 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 ZNF56Q15929 161 aa11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 Q6ZTC4 211 aa11.24□□□□□ -0.61
CLTCL1-207ENST00000611723 M0QY20 66 aa11.23□□□□□ -0.61
CLTCL1-207ENST00000611723 PPBPP02775 128 aa11.23□□□□□ -0.61
CLTCL1-207ENST00000611723 FABP9Q0Z7S8 132 aa11.23□□□□□ -0.61
CLTCL1-207ENST00000611723 SUMO4Q6EEV6 95 aa11.23□□□□□ -0.61
CLTCL1-207ENST00000611723 HHLA3Q9XRX5 114 aa11.23□□□□□ -0.61
CLTCL1-207ENST00000611723 H7C1H1 209 aa11.22□□□□□ -0.61
CLTCL1-207ENST00000611723 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
CLTCL1-207ENST00000611723 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 TRBV10-1A0A0K0K1A3 114 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 F5H768 121 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 PHOX2AO14813 284 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 CKS2P33552 79 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 CRYBA4P53673 196 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 ORMDL3Q8N138 153 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.61
CLTCL1-207ENST00000611723 BIRC6Q9NR09 4857 aa11.21□□□□□ -0.62
CLTCL1-207ENST00000611723 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
CLTCL1-207ENST00000611723 K7EQD1 137 aa11.2□□□□□ -0.62
CLTCL1-207ENST00000611723 PPP1R17O96001 155 aa11.2□□□□□ -0.62
CLTCL1-207ENST00000611723 TRGC2P03986 189 aa11.2□□□□□ -0.62
CLTCL1-207ENST00000611723 RHOHQ15669 191 aa11.2□□□□□ -0.62
CLTCL1-207ENST00000611723 KIAA1644Q3SXP7 199 aa11.2□□□□□ -0.62
CLTCL1-207ENST00000611723 DNAH7Q8WXX0 4024 aa11.2□□□□□ -0.62
CLTCL1-207ENST00000611723 DEFB131BA0A096LNP1 70 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 TRBV6-5A0A0K0K1A5 114 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 D6R8Y8 96 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 NRACQ8N912 160 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 DNAJC30Q96LL9 226 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 PRADC1Q9BSG0 188 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 NIT2Q9NQR4 276 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 EPPK1P58107 5090 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-207ENST00000611723 TENM2Q9NT68 2774 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms