RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 I3L3M4 83 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 HOXD3P31249 432 aaPredicted RBP6.59□□□□□ -1.35
LIG4-204ENST00000611712 RPL39P62891 51 aaKnown RBP6.59□□□□□ -1.35
LIG4-204ENST00000611712 TEX29Q8N6K0 151 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 TOMM6Q96B49 74 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 A0A096LNJ9 63 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 A8MWV9 139 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 IGLL5B9A064 214 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 ZFP2Q6ZN57 461 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 RASL10AQ92737 203 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 SETD2Q9BYW2 2564 aaPredicted RBP6.59□□□□□ -1.35
LIG4-204ENST00000611712 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 A0A0U1RRA0 63 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 ELANEP08246 267 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 PRR9Q5T870 116 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 BAALCQ8WXS3 180 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 UBE2E2Q96LR5 201 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 CNFNQ9BYD5 112 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 K7EMT4 169 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 NPC2P61916 151 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 DEFB136Q30KP8 78 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 TRGV2A0A075B6R0 118 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 F8W1H4 67 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 J3QQQ9 107 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 TIMM21Q9BVV7 248 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 TRGV1A0A0A0MS02 117 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 IGHV3-16A0A0C4DH30 117 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 MED14OSP0DP75 135 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 FGF6P10767 208 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 GPHB5Q86YW7 130 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 Q8N1Y9 231 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 VPREB3Q9UKI3 123 aa6.58□□□□□ -1.36
LIG4-204ENST00000611712 J3QLI3 93 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 IGHV3-53P01767 116 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 IGHG4P01861 327 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 XCL2Q9UBD3 114 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 LGALS1P09382 135 aaKnown RBP6.57□□□□□ -1.36
LIG4-204ENST00000611712 COX8CQ7Z4L0 72 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 NRACQ8N912 160 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 ZNF292O60281 2723 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 FREM2Q5SZK8 3169 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 TEX48A0A1B0GUV7 120 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 INSP01308 110 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 MDFICQ9P1T7 246 aa6.57□□□□□ -1.36
LIG4-204ENST00000611712 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
LIG4-204ENST00000611712 LINC01619G3V211 115 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 Q5PR19 223 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 FOXI2Q6ZQN5 318 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 COL27A1Q8IZC6 1860 aaPredicted RBP6.56□□□□□ -1.36
LIG4-204ENST00000611712 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 RNASE13Q5GAN3 156 aaKnown RBP6.56□□□□□ -1.36
LIG4-204ENST00000611712 MAPKAPK5-AS1Q8N8E1 139 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 TSSC4Q9Y5U2 329 aaPredicted RBP6.56□□□□□ -1.36
LIG4-204ENST00000611712 IGHV4OR15-8A0A075B7B6 117 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 A0A087WW49 117 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 E9PLD3 99 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 Q6ZS46 218 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 TMEM101Q96IK0 257 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 U3KQE9 123 aa6.56□□□□□ -1.36
LIG4-204ENST00000611712 SLURP1P55000 103 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 SH2D6Q7Z4S9 175 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 TOMM7Q9P0U1 55 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 RBX1P62877 108 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 WFDC2Q14508 124 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 LRRK2Q5S007 2527 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 ZFYVE26Q68DK2 2539 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 A0A0J9YX75 114 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 ADARB2-AS1A8MUL3 147 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 RHOHQ15669 191 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 PRORYQ9H606 182 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 YAE1D1Q9NRH1 226 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 POLQO75417 2590 aa6.55□□□□□ -1.36
LIG4-204ENST00000611712 USP34Q70CQ2 3546 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 RPL36AP83881 106 aaKnown RBP6.54□□□□□ -1.36
LIG4-204ENST00000611712 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
LIG4-204ENST00000611712 PRO1854Q9UHT4 67 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 A0A0J9YXV3 536 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 A0A1B0GV72 72 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 RHODO00212 210 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 COPS9Q8WXC6 57 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 Q96MF0 132 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 C9JAW5 83 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 M0R2P5 195 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 PRB1P04280 392 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 NEXN-AS1Q8NBZ9 246 aa6.54□□□□□ -1.36
LIG4-204ENST00000611712 IGHV4-4A0A075B6R2 117 aa6.53□□□□□ -1.36
LIG4-204ENST00000611712 RNASE3P12724 160 aaKnown RBP6.53□□□□□ -1.36
LIG4-204ENST00000611712 OPRPNQ99935 248 aaPredicted RBP6.53□□□□□ -1.36
LIG4-204ENST00000611712 TM2D2Q9BX73 214 aa6.53□□□□□ -1.36
LIG4-204ENST00000611712 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
LIG4-204ENST00000611712 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
LIG4-204ENST00000611712 BOD1L1Q8NFC6 3051 aa6.53□□□□□ -1.36
LIG4-204ENST00000611712 TRBV20-1A0A075B6N2 111 aa6.53□□□□□ -1.36
LIG4-204ENST00000611712 TRGV4A0A0C4DH28 118 aa6.53□□□□□ -1.36
LIG4-204ENST00000611712 APRG1Q8IVJ8 170 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms