RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 CDSNQ15517 529 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 PRO1854Q9UHT4 67 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 ZFHX2Q9C0A1 2572 aaPredicted RBP9.39□□□□□ -0.91
MSH6-212ENST00000607272 EMP1P54849 157 aa9.38□□□□□ -0.91
MSH6-212ENST00000607272 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
MSH6-212ENST00000607272 PTH2Q96A98 100 aa9.38□□□□□ -0.91
MSH6-212ENST00000607272 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
MSH6-212ENST00000607272 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 FHL3Q13643 280 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 ZNF876PQ49A33 203 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 TMEM262E9PQX1 116 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 J3QQQ9 107 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 DEFB1P60022 68 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 ADORA2A-AS1P86434 159 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
MSH6-212ENST00000607272 TRBV27A0A0K0K1C4 114 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 F6UB75 175 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 ZNF688P0C7X2 276 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 XGP55808 180 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 RPL39P62891 51 aaKnown RBP9.36□□□□□ -0.91
MSH6-212ENST00000607272 FAM159AQ6UWV7 190 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 Q6ZS46 218 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 TMEM219Q86XT9 240 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 SPTBN2O15020 2390 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 SPTBN1Q01082 2364 aaKnown RBP9.36□□□□□ -0.91
MSH6-212ENST00000607272 SVEP1Q4LDE5 3571 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 TRAV26-1A0A087WT03 109 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 SDHAF1A6NFY7 115 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 TRBV12-3P01733 135 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 LGALS3P17931 250 aaKnown RBP9.36□□□□□ -0.91
MSH6-212ENST00000607272 TSPEAR-AS2P59090 65 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 ZNRF2Q8NHG8 242 aa9.36□□□□□ -0.91
MSH6-212ENST00000607272 HRNRQ86YZ3 2850 aaPredicted RBP9.36□□□□□ -0.91
MSH6-212ENST00000607272 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
MSH6-212ENST00000607272 KLLNB2CW77 178 aa9.35□□□□□ -0.91
MSH6-212ENST00000607272 F5H697 171 aa9.35□□□□□ -0.91
MSH6-212ENST00000607272 M0QXV9 152 aa9.35□□□□□ -0.91
MSH6-212ENST00000607272 LMO4P61968 165 aa9.35□□□□□ -0.91
MSH6-212ENST00000607272 AMELXQ99217 191 aa9.35□□□□□ -0.91
MSH6-212ENST00000607272 BRI3O95415 125 aa9.35□□□□□ -0.91
MSH6-212ENST00000607272 MUC4Q99102 2169 aa9.34□□□□□ -0.91
MSH6-212ENST00000607272 H3BUA1 57 aa9.34□□□□□ -0.91
MSH6-212ENST00000607272 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
MSH6-212ENST00000607272 LGALS9O00182 355 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 TCF15Q12870 199 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 KHDC1LQ5JSQ8 128 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 RHPN1-AS1Q9BWJ2 59 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 JPT2Q9H910 190 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 PTPRQQ9UMZ3 2332 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 A0A087WWL8 130 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 LEPROTO15243 131 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
MSH6-212ENST00000607272 PTPRZ1P23471 2315 aaPredicted RBP9.33□□□□□ -0.92
MSH6-212ENST00000607272 ASH1LQ9NR48 2969 aaKnown RBP9.32□□□□□ -0.92
MSH6-212ENST00000607272 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 SLC25A20O43772 301 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 RHOHQ15669 191 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 Q8N1Y9 231 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 NBASA2RRP1 2371 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 CEP295Q9C0D2 2601 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 A4D1N5 150 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 ID1P41134 155 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 NSUN5P1Q3KNT7 163 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 WFDC12Q8WWY7 111 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 BPESC1Q9GZL8 116 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 DAZ1Q9NQZ3 744 aaKnown RBP9.32□□□□□ -0.92
MSH6-212ENST00000607272 ERG28Q9UKR5 140 aa9.32□□□□□ -0.92
MSH6-212ENST00000607272 RELNP78509 3460 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 A0A0B4J2C4 111 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 TMEM223A0PJW6 202 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 IGHV3-33P01772 117 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 DEFB104AQ8WTQ1 72 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 A0A1W2PPR1 153 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 TGFAP01135 160 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 P0DMU3 169 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 FAM231AP0DMU4 169 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 FAM231CP0DMU5 169 aa9.31□□□□□ -0.92
MSH6-212ENST00000607272 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.3□□□□□ -0.92
MSH6-212ENST00000607272 C9JAW5 83 aa9.3□□□□□ -0.92
MSH6-212ENST00000607272 Q5PR19 223 aa9.3□□□□□ -0.92
MSH6-212ENST00000607272 ZFAND6Q6FIF0 208 aa9.3□□□□□ -0.92
MSH6-212ENST00000607272 TMEM263Q8WUH6 116 aaKnown RBP9.3□□□□□ -0.92
MSH6-212ENST00000607272 ZNF256Q9Y2P7 627 aaPredicted RBP9.3□□□□□ -0.92
MSH6-212ENST00000607272 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 M0QY20 66 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 IGHG2P01859 326 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 FAM74A4Q5TZK3 123 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 A0A0J9YX75 114 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
MSH6-212ENST00000607272 TEX29Q8N6K0 151 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 C9orf85Q96MD7 179 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 UBTD1Q9HAC8 227 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 MDFICQ9P1T7 246 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 X6R8D5 127 aa9.29□□□□□ -0.92
MSH6-212ENST00000607272 TRAV2A0A0B4J234 112 aa9.28□□□□□ -0.92
MSH6-212ENST00000607272 IGHV3-16A0A0C4DH30 117 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms