RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ALKAL2Q6UX46 152 aa9.83□□□□□ -0.84
CTSA-216ENST00000607212 ZFP2Q6ZN57 461 aa9.83□□□□□ -0.84
CTSA-216ENST00000607212 C14orf178Q8N769 122 aaPredicted RBP9.83□□□□□ -0.84
CTSA-216ENST00000607212 SAMD10Q9BYL1 202 aa9.83□□□□□ -0.84
CTSA-216ENST00000607212 SRRM2Q9UQ35 2752 aaKnown RBP9.83□□□□□ -0.84
CTSA-216ENST00000607212 FABP5P3A8MUU1 101 aa9.82□□□□□ -0.84
CTSA-216ENST00000607212 B4DEV8 164 aa9.82□□□□□ -0.84
CTSA-216ENST00000607212 IGLV2-11P01706 119 aa9.82□□□□□ -0.84
CTSA-216ENST00000607212 ATP6V0CP27449 155 aa9.82□□□□□ -0.84
CTSA-216ENST00000607212 OR2G3Q8NGZ4 309 aa9.82□□□□□ -0.84
CTSA-216ENST00000607212 PSMG3Q9BT73 122 aaPredicted RBP9.82□□□□□ -0.84
CTSA-216ENST00000607212 JPT2Q9H910 190 aa9.82□□□□□ -0.84
CTSA-216ENST00000607212 A0A087WX48 190 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 M0R036 132 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 UBE2G2P60604 165 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 Q8N976 141 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 UBE2WQ96B02 151 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 KLK12Q9UKR0 248 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 ARL2-SNX15V9GYD0 113 aa9.81□□□□□ -0.84
CTSA-216ENST00000607212 KANTRA0A1W2PQU2 76 aa9.8□□□□□ -0.84
CTSA-216ENST00000607212 RHODO00212 210 aa9.8□□□□□ -0.84
CTSA-216ENST00000607212 Q6ZSA8 131 aa9.8□□□□□ -0.84
CTSA-216ENST00000607212 SCXQ7RTU7 201 aa9.8□□□□□ -0.84
CTSA-216ENST00000607212 A0A087WWL8 130 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 GRIFINA4D1Z8 144 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 SERF2P84101 59 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 ELOBQ15370 118 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 SUN5Q8TC36 379 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 Q9UF83 564 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 PHLDA3Q9Y5J5 127 aa9.79□□□□□ -0.84
CTSA-216ENST00000607212 TMSB15BA0A087X1C1 80 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
CTSA-216ENST00000607212 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 M0R381 172 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 PEX7O00628 323 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 ARMS2P0C7Q2 107 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 LINC00694P0DN24 101 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 TPT1P13693 172 aaKnown RBP9.78□□□□□ -0.84
CTSA-216ENST00000607212 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 Q86TA4 180 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 INO80EQ8NBZ0 244 aaPredicted RBP9.78□□□□□ -0.84
CTSA-216ENST00000607212 CYTL1Q9NRR1 136 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 IL36BQ9NZH7 164 aa9.78□□□□□ -0.84
CTSA-216ENST00000607212 BORCS7-ASMTA0A0B4J1R7 106 aa9.77□□□□□ -0.85
CTSA-216ENST00000607212 UBE2G1P62253 170 aa9.77□□□□□ -0.85
CTSA-216ENST00000607212 NIT1Q86X76 327 aa9.77□□□□□ -0.85
CTSA-216ENST00000607212 DNAJC30Q96LL9 226 aa9.77□□□□□ -0.85
CTSA-216ENST00000607212 ZNF471Q9BX82 626 aaPredicted RBP9.77□□□□□ -0.85
CTSA-216ENST00000607212 DNAH8Q96JB1 4490 aa9.76□□□□□ -0.85
CTSA-216ENST00000607212 SH2D1AO60880 128 aa9.76□□□□□ -0.85
CTSA-216ENST00000607212 CRPP02741 224 aa9.76□□□□□ -0.85
CTSA-216ENST00000607212 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
CTSA-216ENST00000607212 STOML3Q8TAV4 291 aa9.76□□□□□ -0.85
CTSA-216ENST00000607212 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
CTSA-216ENST00000607212 AQP10Q96PS8 301 aa9.76□□□□□ -0.85
CTSA-216ENST00000607212 C1orf43Q9BWL3 253 aa9.76□□□□□ -0.85
CTSA-216ENST00000607212 CTXND1A0A1B0GTU2 59 aa9.75□□□□□ -0.85
CTSA-216ENST00000607212 C14orf177Q52M58 125 aa9.75□□□□□ -0.85
CTSA-216ENST00000607212 AKR1C8PQ5T2L2 129 aa9.75□□□□□ -0.85
CTSA-216ENST00000607212 FAM162BQ5T6X4 162 aa9.75□□□□□ -0.85
CTSA-216ENST00000607212 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
CTSA-216ENST00000607212 CHAC1Q9BUX1 264 aa9.75□□□□□ -0.85
CTSA-216ENST00000607212 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 TEX46H3BTG2 121 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 SCO1O75880 301 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 IGLV2-8P01709 118 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 Q0VG73 95 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 RPL7L1Q6DKI1 246 aaKnown RBP9.74□□□□□ -0.85
CTSA-216ENST00000607212 UFSP1Q6NVU6 142 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 ZFP82Q8N141 532 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 HIST1H2BAQ96A08 127 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 SFRP2Q96HF1 295 aa9.74□□□□□ -0.85
CTSA-216ENST00000607212 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
CTSA-216ENST00000607212 C15orf54Q8N8G6 183 aa9.73□□□□□ -0.85
CTSA-216ENST00000607212 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.73□□□□□ -0.85
CTSA-216ENST00000607212 CIRBP-AS1Q8TBR5 109 aa9.73□□□□□ -0.85
CTSA-216ENST00000607212 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
CTSA-216ENST00000607212 NKX6-2Q9C056 277 aaPredicted RBP9.73□□□□□ -0.85
CTSA-216ENST00000607212 ZFP30Q9Y2G7 519 aa9.73□□□□□ -0.85
CTSA-216ENST00000607212 FAM74A7A6NL05 159 aa9.72□□□□□ -0.85
CTSA-216ENST00000607212 HLA-DQA1P01909 254 aa9.72□□□□□ -0.85
CTSA-216ENST00000607212 ZNF56Q15929 161 aa9.72□□□□□ -0.85
CTSA-216ENST00000607212 CST9LP1Q5W188 147 aa9.72□□□□□ -0.85
CTSA-216ENST00000607212 FMC1Q96HJ9 113 aa9.72□□□□□ -0.85
CTSA-216ENST00000607212 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
CTSA-216ENST00000607212 TRBV10-1A0A0K0K1A3 114 aa9.71□□□□□ -0.86
CTSA-216ENST00000607212 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.86
CTSA-216ENST00000607212 AKR1C3P42330 323 aa9.71□□□□□ -0.86
CTSA-216ENST00000607212 CRIP1P50238 77 aa9.71□□□□□ -0.86
CTSA-216ENST00000607212 ZNF726P1Q15940 193 aa9.71□□□□□ -0.86
CTSA-216ENST00000607212 CHCHD5Q9BSY4 110 aa9.71□□□□□ -0.86
CTSA-216ENST00000607212 TMA7Q9Y2S6 64 aaKnown RBP9.71□□□□□ -0.86
CTSA-216ENST00000607212 MAP1LC3B2A6NCE7 125 aa9.7□□□□□ -0.86
CTSA-216ENST00000607212 UBE2D3P61077 147 aa9.7□□□□□ -0.86
CTSA-216ENST00000607212 UBE2D2P62837 147 aa9.7□□□□□ -0.86
CTSA-216ENST00000607212 DNLZQ5SXM8 178 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms