RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 MEGF8Q7Z7M0 2845 aa11.78□□□□□ -0.52
PMF1-206ENST00000606952 TRGV1A0A0A0MS02 117 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 RHODO00212 210 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 APCSP02743 223 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 RAB4AP20338 218 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 SSTP61278 116 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 DEFA6Q01524 100 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 FABP9Q0Z7S8 132 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 CFAP126Q5VTH2 177 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 Q6ZTI0 123 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 AMN1Q8IY45 258 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 JPT2Q9H910 190 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 DKK2Q9UBU2 259 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 U3KQK5 164 aa11.77□□□□□ -0.53
PMF1-206ENST00000606952 TRAV4A0A0B4J268 109 aa11.76□□□□□ -0.53
PMF1-206ENST00000606952 C14orf178Q8N769 122 aaPredicted RBP11.76□□□□□ -0.53
PMF1-206ENST00000606952 MRPL51Q4U2R6 128 aaKnown RBP11.75□□□□□ -0.53
PMF1-206ENST00000606952 MRAP2Q96G30 205 aa11.75□□□□□ -0.53
PMF1-206ENST00000606952 SAMD10Q9BYL1 202 aa11.75□□□□□ -0.53
PMF1-206ENST00000606952 PPBPP02775 128 aa11.74□□□□□ -0.53
PMF1-206ENST00000606952 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
PMF1-206ENST00000606952 FAM222AQ5U5X8 452 aa11.74□□□□□ -0.53
PMF1-206ENST00000606952 A0A087WWL8 130 aa11.73□□□□□ -0.53
PMF1-206ENST00000606952 C1orf196B1AJZ1 125 aa11.73□□□□□ -0.53
PMF1-206ENST00000606952 LAMTOR2Q9Y2Q5 125 aa11.73□□□□□ -0.53
PMF1-206ENST00000606952 SPART-AS1P0CW21 52 aa11.72□□□□□ -0.53
PMF1-206ENST00000606952 EMP1P54849 157 aa11.72□□□□□ -0.53
PMF1-206ENST00000606952 ORMDL3Q8N138 153 aa11.72□□□□□ -0.53
PMF1-206ENST00000606952 ALKBH7Q9BT30 221 aaPredicted RBP11.72□□□□□ -0.53
PMF1-206ENST00000606952 ZMAT4Q9H898 229 aa11.72□□□□□ -0.53
PMF1-206ENST00000606952 NBEAL2Q6ZNJ1 2754 aa11.72□□□□□ -0.53
PMF1-206ENST00000606952 TENM3Q9P273 2699 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 GAGE12BA1L429 117 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 GAGE7O76087 117 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 GAGE12FP0CL80 117 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 GAGE12GP0CL81 117 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 GAGE12IP0CL82 117 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 KIAA1644Q3SXP7 199 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 CELA1Q9UNI1 258 aa11.71□□□□□ -0.53
PMF1-206ENST00000606952 D6R8Y8 96 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 DEFB4AO15263 64 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 MGPP08493 103 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 NHLRC4P0CG21 123 aaPredicted RBP11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
PMF1-206ENST00000606952 FAM74A4Q5TZK3 123 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 NRACQ8N912 160 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 ZNF479Q96JC4 524 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
PMF1-206ENST00000606952 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
PMF1-206ENST00000606952 PRSS47A8MTI9 375 aa11.69□□□□□ -0.54
PMF1-206ENST00000606952 M0QY20 66 aa11.69□□□□□ -0.54
PMF1-206ENST00000606952 PPP1R17O96001 155 aa11.69□□□□□ -0.54
PMF1-206ENST00000606952 SRIP30626 198 aa11.69□□□□□ -0.54
PMF1-206ENST00000606952 CKS2P33552 79 aa11.69□□□□□ -0.54
PMF1-206ENST00000606952 RAB5BP61020 215 aa11.69□□□□□ -0.54
PMF1-206ENST00000606952 GATA1P15976 413 aaPredicted RBP11.68□□□□□ -0.54
PMF1-206ENST00000606952 ZNF56Q15929 161 aa11.68□□□□□ -0.54
PMF1-206ENST00000606952 PRELID3AQ96N28 172 aa11.68□□□□□ -0.54
PMF1-206ENST00000606952 TRBV6-5A0A0K0K1A5 114 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 H7C1H1 209 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 NCR2O95944 276 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 DEFB130BP0DP73 79 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 DEFB130AP0DP74 79 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 DAD1P61803 113 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 Q0VG73 95 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 FHL2Q14192 279 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 OR10J3Q5JRS4 329 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
PMF1-206ENST00000606952 TRAV26-2A0A0B4J265 109 aa11.66□□□□□ -0.54
PMF1-206ENST00000606952 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
PMF1-206ENST00000606952 TRBV6-4A0A1B0GX49 114 aa11.66□□□□□ -0.54
PMF1-206ENST00000606952 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
PMF1-206ENST00000606952 NPYP01303 97 aa11.66□□□□□ -0.54
PMF1-206ENST00000606952 RPL32P62910 135 aaKnown RBP11.66□□□□□ -0.54
PMF1-206ENST00000606952 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
PMF1-206ENST00000606952 Q6ZSN1 163 aa11.66□□□□□ -0.54
PMF1-206ENST00000606952 TRBV10-1A0A0K0K1A3 114 aa11.65□□□□□ -0.54
PMF1-206ENST00000606952 F5H697 171 aa11.65□□□□□ -0.54
PMF1-206ENST00000606952 TNFRSF6BO95407 300 aa11.65□□□□□ -0.54
PMF1-206ENST00000606952 C12orf74Q32Q52 190 aa11.65□□□□□ -0.54
PMF1-206ENST00000606952 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
PMF1-206ENST00000606952 IGHV3-73A0A0B4J1V6 119 aa11.64□□□□□ -0.55
PMF1-206ENST00000606952 K7EQD1 137 aa11.64□□□□□ -0.55
PMF1-206ENST00000606952 ATP5G1P05496 136 aa11.64□□□□□ -0.55
PMF1-206ENST00000606952 DNAJC30Q96LL9 226 aa11.64□□□□□ -0.55
PMF1-206ENST00000606952 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms