RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 SCGB1C2P0DMR2 95 aa11.44□□□□□ -0.58
LYSMD4-211ENST00000604213 ERG28Q9UKR5 140 aa11.44□□□□□ -0.58
LYSMD4-211ENST00000604213 J3QQQ9 107 aa11.43□□□□□ -0.58
LYSMD4-211ENST00000604213 RNF183Q96D59 192 aa11.43□□□□□ -0.58
LYSMD4-211ENST00000604213 TRBV7-9A0A0J9YWB2 115 aa11.43□□□□□ -0.58
LYSMD4-211ENST00000604213 NDUFA4O00483 81 aa11.43□□□□□ -0.58
LYSMD4-211ENST00000604213 CCL21O00585 134 aa11.43□□□□□ -0.58
LYSMD4-211ENST00000604213 EIF4EBP3O60516 100 aaPredicted RBP11.43□□□□□ -0.58
LYSMD4-211ENST00000604213 TMEM219Q86XT9 240 aa11.43□□□□□ -0.58
LYSMD4-211ENST00000604213 ASH1LQ9NR48 2969 aaKnown RBP11.42□□□□□ -0.58
LYSMD4-211ENST00000604213 NPFFO15130 113 aa11.42□□□□□ -0.58
LYSMD4-211ENST00000604213 A0A087WWL8 130 aa11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 TRBV27A0A0K0K1C4 114 aa11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 A4D1N5 150 aa11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 SDHAF1A6NFY7 115 aa11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 TMEM262E9PQX1 116 aa11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 M0QXV9 152 aa11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 SLC25A20O43772 301 aa11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 CRIP2P52943 208 aaPredicted RBP11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 RPL11P62913 178 aaKnown RBP11.41□□□□□ -0.58
LYSMD4-211ENST00000604213 IGHV3-33P01772 117 aa11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 RAX2Q96IS3 184 aa11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 RIF1Q5UIP0 2472 aaKnown RBP11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 KLLNB2CW77 178 aa11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 GATA3P23771 443 aa11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 ADORA2A-AS1P86434 159 aa11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 MOB4Q9Y3A3 225 aa11.4□□□□□ -0.58
LYSMD4-211ENST00000604213 IGKV3-7A0A075B6H7 116 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 C9JAW5 83 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 F5H697 171 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 TRPT1Q86TN4 253 aaKnown RBP11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 CITED1Q99966 193 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 RELNP78509 3460 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 LGALS9O00182 355 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 LEPROTO15243 131 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 ZFAND6Q6FIF0 208 aa11.39□□□□□ -0.59
LYSMD4-211ENST00000604213 FAM159AQ6UWV7 190 aa11.38□□□□□ -0.59
LYSMD4-211ENST00000604213 OPRPNQ99935 248 aaPredicted RBP11.38□□□□□ -0.59
LYSMD4-211ENST00000604213 SPTBN2O15020 2390 aa11.38□□□□□ -0.59
LYSMD4-211ENST00000604213 LMO4P61968 165 aa11.38□□□□□ -0.59
LYSMD4-211ENST00000604213 ANAPC13Q9BS18 74 aa11.38□□□□□ -0.59
LYSMD4-211ENST00000604213 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
LYSMD4-211ENST00000604213 A0A1W2PPR1 153 aa11.37□□□□□ -0.59
LYSMD4-211ENST00000604213 P0DMU3 169 aa11.37□□□□□ -0.59
LYSMD4-211ENST00000604213 FAM231AP0DMU4 169 aa11.37□□□□□ -0.59
LYSMD4-211ENST00000604213 FAM231CP0DMU5 169 aa11.37□□□□□ -0.59
LYSMD4-211ENST00000604213 K7ENP7 123 aa11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 IGHV1-69P01742 117 aa11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 MUSTN1Q8IVN3 82 aa11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 RHPN1-AS1Q9BWJ2 59 aa11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 ZNF256Q9Y2P7 627 aaPredicted RBP11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 TRAV2A0A0B4J234 112 aa11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 IGHV3-11P01762 117 aa11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 TEX29Q8N6K0 151 aa11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 ZFHX2Q9C0A1 2572 aaPredicted RBP11.36□□□□□ -0.59
LYSMD4-211ENST00000604213 H7C2G1 150 aa11.35□□□□□ -0.59
LYSMD4-211ENST00000604213 ELANEP08246 267 aa11.35□□□□□ -0.59
LYSMD4-211ENST00000604213 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
LYSMD4-211ENST00000604213 NSUN5P1Q3KNT7 163 aa11.35□□□□□ -0.59
LYSMD4-211ENST00000604213 M0QY20 66 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 SRD5A1P18405 259 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 RHOHQ15669 191 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 IGHV3OR16-10A0A075B7F0 116 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 TRAV12-3A0A0B4J271 114 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 RHODO00212 210 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 USMG5Q96IX5 58 aa11.34□□□□□ -0.59
LYSMD4-211ENST00000604213 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 M0R2P5 195 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 C9orf85Q96MD7 179 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 IGHV3-16A0A0C4DH30 117 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 A0A0J9YX75 114 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 Q8N1Y9 231 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 NTN5Q8WTR8 489 aaPredicted RBP11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 BPESC1Q9GZL8 116 aa11.33□□□□□ -0.6
LYSMD4-211ENST00000604213 BRI3O95415 125 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 ATXN8Q156A1 80 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 SPTA1P02549 2419 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 SPTBN1Q01082 2364 aaKnown RBP11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 ZFHX3Q15911 3703 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 EDN2P20800 178 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 MDFICQ9P1T7 246 aa11.32□□□□□ -0.6
LYSMD4-211ENST00000604213 H3BUA1 57 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 TCF15Q12870 199 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 GAGE5Q13069 117 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 GAGE6Q13070 117 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 ZNF56Q15929 161 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 C20orf203Q8NBC4 194 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 ZNF580Q9UK33 172 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
LYSMD4-211ENST00000604213 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms