RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 ZNF876PQ49A33 203 aa10.39□□□□□ -0.75
ZNF548-212ENST00000602086 RASL10AQ92737 203 aa10.39□□□□□ -0.75
ZNF548-212ENST00000602086 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
ZNF548-212ENST00000602086 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
ZNF548-212ENST00000602086 AZU1P20160 251 aa10.38□□□□□ -0.75
ZNF548-212ENST00000602086 CKS2P33552 79 aa10.38□□□□□ -0.75
ZNF548-212ENST00000602086 LINC00315P59091 139 aa10.38□□□□□ -0.75
ZNF548-212ENST00000602086 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
ZNF548-212ENST00000602086 Q6ZWC4 215 aa10.38□□□□□ -0.75
ZNF548-212ENST00000602086 OVOL2Q9BRP0 275 aa10.38□□□□□ -0.75
ZNF548-212ENST00000602086 LOC105371267A0A1B0GV96 52 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 PRSS47A8MTI9 375 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 D6R8Y8 96 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 G3V4G9 280 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 PPP1R17O96001 155 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 BAGE3Q86Y29 109 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
ZNF548-212ENST00000602086 PRELID3AQ96N28 172 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 EDA2RQ9HAV5 297 aa10.37□□□□□ -0.75
ZNF548-212ENST00000602086 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
ZNF548-212ENST00000602086 CRYGDP07320 174 aa10.36□□□□□ -0.75
ZNF548-212ENST00000602086 RHODO00212 210 aa10.35□□□□□ -0.75
ZNF548-212ENST00000602086 RS1O15537 224 aa10.35□□□□□ -0.75
ZNF548-212ENST00000602086 CIDEAO60543 219 aa10.35□□□□□ -0.75
ZNF548-212ENST00000602086 PRM2P04554 102 aa10.35□□□□□ -0.75
ZNF548-212ENST00000602086 HIST3H2BBQ8N257 126 aa10.35□□□□□ -0.75
ZNF548-212ENST00000602086 PACRGQ96M98 296 aaPredicted RBP10.35□□□□□ -0.75
ZNF548-212ENST00000602086 TP53TG1Q9Y2A0 90 aa10.35□□□□□ -0.75
ZNF548-212ENST00000602086 X6R8D5 127 aa10.35□□□□□ -0.75
ZNF548-212ENST00000602086 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
ZNF548-212ENST00000602086 ZFP2Q6ZN57 461 aa10.34□□□□□ -0.75
ZNF548-212ENST00000602086 CHCHD1Q96BP2 118 aaKnown RBP10.34□□□□□ -0.75
ZNF548-212ENST00000602086 RNF183Q96D59 192 aa10.34□□□□□ -0.75
ZNF548-212ENST00000602086 SERF1AO75920 110 aa10.33□□□□□ -0.76
ZNF548-212ENST00000602086 TNFRSF6BO95407 300 aa10.33□□□□□ -0.76
ZNF548-212ENST00000602086 LINC00310P59036 64 aa10.33□□□□□ -0.76
ZNF548-212ENST00000602086 NRACQ8N912 160 aa10.33□□□□□ -0.76
ZNF548-212ENST00000602086 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
ZNF548-212ENST00000602086 JPT2Q9H910 190 aa10.33□□□□□ -0.76
ZNF548-212ENST00000602086 DNAH3Q8TD57 4116 aa10.33□□□□□ -0.76
ZNF548-212ENST00000602086 LINC01546A6NGU7 62 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 NPYP01303 97 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 MIFP14174 115 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
ZNF548-212ENST00000602086 CFAP126Q5VTH2 177 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 NIT1Q86X76 327 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 LINC00612Q8N6U2 182 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 C18orf15Q96N68 181 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 SAMD10Q9BYL1 202 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 MAP1LC3AQ9H492 121 aa10.32□□□□□ -0.76
ZNF548-212ENST00000602086 A0A087WWL8 130 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 TRBV6-5A0A0K0K1A5 114 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 SMKR1H3BMG3 65 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 H7C1H1 209 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 NCR2O95944 276 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 MGPP08493 103 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 LINC00614P0C842 121 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 PMCHP20382 165 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 S100A2P29034 98 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 IQCJQ1A5X6 159 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 DEFB135Q30KP9 77 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 TMEM18Q96B42 140 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 URB1-AS1Q96HZ7 61 aa10.31□□□□□ -0.76
ZNF548-212ENST00000602086 NXT2Q9NPJ8 142 aaKnown RBP10.31□□□□□ -0.76
ZNF548-212ENST00000602086 MRPL16Q9NX20 251 aaKnown RBP10.31□□□□□ -0.76
ZNF548-212ENST00000602086 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
ZNF548-212ENST00000602086 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
ZNF548-212ENST00000602086 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
ZNF548-212ENST00000602086 OR11H2Q8NH07 326 aa10.3□□□□□ -0.76
ZNF548-212ENST00000602086 NOP10Q9NPE3 64 aaKnown RBP10.3□□□□□ -0.76
ZNF548-212ENST00000602086 NACAE9PAV3 2078 aa10.3□□□□□ -0.76
ZNF548-212ENST00000602086 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 LYRM9A8MSI8 78 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 K7EMI3 77 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 M0QY20 66 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 NUPR1O60356 82 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 Q6ZTI0 123 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 Q8N8P6 123 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 PRSS3P2Q8NHM4 247 aa10.29□□□□□ -0.76
ZNF548-212ENST00000602086 IGLV2-18A0A075B6J9 118 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 TRAV26-2A0A0B4J265 109 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 F5H697 171 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 HSBP1O75506 76 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 GAS8-AS1O95177 125 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 GATA1P15976 413 aaPredicted RBP10.28□□□□□ -0.76
ZNF548-212ENST00000602086 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
ZNF548-212ENST00000602086 ZNF56Q15929 161 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 FA2HQ7L5A8 372 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 AP5S1Q9NUS5 200 aa10.28□□□□□ -0.76
ZNF548-212ENST00000602086 IFI27P40305 119 aaPredicted RBP10.27□□□□□ -0.77
ZNF548-212ENST00000602086 RNASEKQ6P5S7 137 aaKnown RBP10.27□□□□□ -0.77
ZNF548-212ENST00000602086 Q8NAQ8 132 aa10.27□□□□□ -0.77
ZNF548-212ENST00000602086 SMIM2Q9BVW6 85 aa10.27□□□□□ -0.77
ZNF548-212ENST00000602086 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
ZNF548-212ENST00000602086 NOTCH1P46531 2555 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms