RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 GPHB5Q86YW7 130 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 BUB3O43684 328 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 CKS1BP61024 79 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 TMEM141Q96I45 108 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 C9JAW5 83 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 IGHG4P01861 327 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 C16orf54Q6UWD8 224 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 CRYGCP07315 174 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 ZNF80P51504 273 aaPredicted RBP8.45□□□□□ -1.06
ZNF558-207ENST00000601372 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 FANCD2OSQ96PS1 177 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 SPART-AS1P0CW21 52 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
ZNF558-207ENST00000601372 C10orf99Q6UWK7 81 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 LINC00574Q9H8X3 128 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 PSMG3-AS1Q96PY0 264 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
ZNF558-207ENST00000601372 F8VRH5 84 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 U3KQE9 123 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 HCFC1P51610 2035 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 ANKHD1Q8IWZ3 2542 aaKnown RBP8.44□□□□□ -1.06
ZNF558-207ENST00000601372 TRAV25A0A0B4J276 109 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 UNQ9165/PRO28630Q6UXU0 137 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 LINC01006Q8NI28 216 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
ZNF558-207ENST00000601372 F8W735 103 aaPredicted RBP8.44□□□□□ -1.06
ZNF558-207ENST00000601372 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 SS18Q15532 418 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 ZNF702PQ9H963 129 aa8.44□□□□□ -1.06
ZNF558-207ENST00000601372 RHODO00212 210 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 TRBV25-1A0A075B6N4 114 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 RBMY1BA6NDE4 496 aaKnown RBP8.43□□□□□ -1.06
ZNF558-207ENST00000601372 RBMY1EA6NEQ0 496 aaKnown RBP8.43□□□□□ -1.06
ZNF558-207ENST00000601372 RBMY1DP0C7P1 496 aaKnown RBP8.43□□□□□ -1.06
ZNF558-207ENST00000601372 RBMY1A1P0DJD3 496 aaKnown RBP8.43□□□□□ -1.06
ZNF558-207ENST00000601372 RBMY1CP0DJD4 496 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 C12orf74Q32Q52 190 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 C2orf82Q6UX34 121 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 C16orf74Q96GX8 76 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 AVPP01185 164 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 ESM1Q9NQ30 184 aa8.43□□□□□ -1.06
ZNF558-207ENST00000601372 ARHGAP32A7KAX9 2087 aa8.42□□□□□ -1.06
ZNF558-207ENST00000601372 TEX48A0A1B0GUV7 120 aa8.42□□□□□ -1.06
ZNF558-207ENST00000601372 K7EMT4 169 aa8.42□□□□□ -1.06
ZNF558-207ENST00000601372 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
ZNF558-207ENST00000601372 TAX1BP3O14907 124 aa8.42□□□□□ -1.06
ZNF558-207ENST00000601372 SIVA1O15304 175 aa8.42□□□□□ -1.06
ZNF558-207ENST00000601372 GAGE6Q13070 117 aa8.42□□□□□ -1.06
ZNF558-207ENST00000601372 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
ZNF558-207ENST00000601372 C20orf78Q9BR46 151 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.41□□□□□ -1.06
ZNF558-207ENST00000601372 IGKV2-29A2NJV5 120 aaPredicted RBP8.41□□□□□ -1.06
ZNF558-207ENST00000601372 VWC2LB2RUY7 222 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 CRYGBP07316 175 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 ETDBQ3ZM63 59 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 TMEM61Q8N0U2 210 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 GATD1Q8NB37 220 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 LY6LH3BQJ8 138 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 RNASE8Q8TDE3 154 aaKnown RBP8.41□□□□□ -1.06
ZNF558-207ENST00000601372 RASL10AQ92737 203 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 CLPSL2Q6UWE3 100 aa8.41□□□□□ -1.06
ZNF558-207ENST00000601372 IGLL5B9A064 214 aa8.4□□□□□ -1.06
ZNF558-207ENST00000601372 IGF1P05019 195 aa8.4□□□□□ -1.06
ZNF558-207ENST00000601372 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
ZNF558-207ENST00000601372 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
ZNF558-207ENST00000601372 CRIP1P50238 77 aa8.4□□□□□ -1.06
ZNF558-207ENST00000601372 MKI67P46013 3256 aaKnown RBP8.4□□□□□ -1.06
ZNF558-207ENST00000601372 CCL18P55774 89 aa8.4□□□□□ -1.06
ZNF558-207ENST00000601372 C18orf65Q6ZTR6 163 aa8.4□□□□□ -1.07
ZNF558-207ENST00000601372 FXYD2P54710 66 aa8.4□□□□□ -1.07
ZNF558-207ENST00000601372 Q9HAA7 133 aa8.4□□□□□ -1.07
ZNF558-207ENST00000601372 HTTP42858 3142 aa8.4□□□□□ -1.07
ZNF558-207ENST00000601372 PRIMA1Q86XR5 153 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 RMI2Q96E14 147 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 PRB2P02812 416 aaPredicted RBP8.39□□□□□ -1.07
ZNF558-207ENST00000601372 SPATA12Q7Z6I5 190 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 J3QQQ9 107 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 CTRLP40313 264 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 MLST8Q9BVC4 326 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 Q6ZS46 218 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 FAM110AQ9BQ89 295 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 F8W1H4 67 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 FGF6P10767 208 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 ZFAND6Q6FIF0 208 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 JPT2Q9H910 190 aa8.39□□□□□ -1.07
ZNF558-207ENST00000601372 C9orf47Q6ZRZ4 202 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 IL17DQ8TAD2 202 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 MAP6D1Q9H9H5 199 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 ATRXP46100 2492 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 PCSK5Q92824 1860 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 ANGP03950 147 aaKnown RBP8.38□□□□□ -1.07
ZNF558-207ENST00000601372 TMEM243Q9BU79 118 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 ATP5G1P05496 136 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 Q6ZQT7 251 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 BAALCQ8WXS3 180 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms