RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 RHODO00212 210 aa11.79□□□□□ -0.52
CHMP2A-208ENST00000601220 SH2D1AO60880 128 aa11.79□□□□□ -0.52
CHMP2A-208ENST00000601220 KRTAP10-4P60372 401 aaPredicted RBP11.79□□□□□ -0.52
CHMP2A-208ENST00000601220 M0R036 132 aa11.78□□□□□ -0.52
CHMP2A-208ENST00000601220 GIPP09681 153 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-208ENST00000601220 ZNF674Q2M3X9 581 aa11.78□□□□□ -0.52
CHMP2A-208ENST00000601220 SCXQ7RTU7 201 aa11.78□□□□□ -0.52
CHMP2A-208ENST00000601220 NKX6-2Q9C056 277 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-208ENST00000601220 ZFP30Q9Y2G7 519 aa11.78□□□□□ -0.52
CHMP2A-208ENST00000601220 A0A087WWL8 130 aa11.77□□□□□ -0.53
CHMP2A-208ENST00000601220 ATRAIDQ6UW56 229 aa11.77□□□□□ -0.53
CHMP2A-208ENST00000601220 Q8N976 141 aa11.77□□□□□ -0.53
CHMP2A-208ENST00000601220 SYT8Q8NBV8 401 aa11.77□□□□□ -0.53
CHMP2A-208ENST00000601220 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-208ENST00000601220 OR11H4Q8NGC9 324 aa11.77□□□□□ -0.53
CHMP2A-208ENST00000601220 KLK12Q9UKR0 248 aa11.77□□□□□ -0.53
CHMP2A-208ENST00000601220 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 TRBV6-1A0A0K0K1D8 114 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 PTTG1O95997 202 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 FAM162BQ5T6X4 162 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 FAM74A4Q5TZK3 123 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 DEFB104AQ8WTQ1 72 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 RMI2Q96E14 147 aa11.76□□□□□ -0.53
CHMP2A-208ENST00000601220 IGKV2D-24A0A075B6R9 120 aa11.75□□□□□ -0.53
CHMP2A-208ENST00000601220 G3V3Q6 166 aa11.75□□□□□ -0.53
CHMP2A-208ENST00000601220 UBE2D3P61077 147 aa11.75□□□□□ -0.53
CHMP2A-208ENST00000601220 UBE2D2P62837 147 aa11.75□□□□□ -0.53
CHMP2A-208ENST00000601220 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
CHMP2A-208ENST00000601220 PHLDA3Q9Y5J5 127 aa11.75□□□□□ -0.53
CHMP2A-208ENST00000601220 FAT3Q8TDW7 4589 aa11.75□□□□□ -0.53
CHMP2A-208ENST00000601220 FXYD6-FXYD2A0A087WZ82 144 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 TRBV10-1A0A0K0K1A3 114 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 RBFOX3A6NFN3 312 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 LTAP01374 205 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 FMC1Q96HJ9 113 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 CHAC1Q9BUX1 264 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 CYTL1Q9NRR1 136 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 URGCP-MRPS24S4R325 110 aa11.74□□□□□ -0.53
CHMP2A-208ENST00000601220 TMSB15BA0A087X1C1 80 aa11.73□□□□□ -0.53
CHMP2A-208ENST00000601220 M0R381 172 aa11.73□□□□□ -0.53
CHMP2A-208ENST00000601220 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
CHMP2A-208ENST00000601220 TPT1P13693 172 aaKnown RBP11.73□□□□□ -0.53
CHMP2A-208ENST00000601220 OR10G8Q8NGN5 311 aa11.73□□□□□ -0.53
CHMP2A-208ENST00000601220 UBE2WQ96B02 151 aa11.73□□□□□ -0.53
CHMP2A-208ENST00000601220 TRBV7-3A0A075B6L6 115 aa11.72□□□□□ -0.53
CHMP2A-208ENST00000601220 FHITP49789 147 aa11.72□□□□□ -0.53
CHMP2A-208ENST00000601220 AKR1C8PQ5T2L2 129 aa11.72□□□□□ -0.53
CHMP2A-208ENST00000601220 ZFP82Q8N141 532 aa11.72□□□□□ -0.53
CHMP2A-208ENST00000601220 CIRBP-AS1Q8TBR5 109 aa11.72□□□□□ -0.53
CHMP2A-208ENST00000601220 HMCN2Q8NDA2 5059 aa11.71□□□□□ -0.53
CHMP2A-208ENST00000601220 MAP1LC3B2A6NCE7 125 aa11.71□□□□□ -0.53
CHMP2A-208ENST00000601220 ENHOQ6UWT2 76 aa11.71□□□□□ -0.53
CHMP2A-208ENST00000601220 TCEAL7Q9BRU2 100 aa11.71□□□□□ -0.53
CHMP2A-208ENST00000601220 MAP1LC3BQ9GZQ8 125 aa11.71□□□□□ -0.53
CHMP2A-208ENST00000601220 A0A087WX48 190 aa11.7□□□□□ -0.54
CHMP2A-208ENST00000601220 UBE2G1P62253 170 aa11.7□□□□□ -0.54
CHMP2A-208ENST00000601220 RPL36AP83881 106 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-208ENST00000601220 ELOBQ15370 118 aa11.7□□□□□ -0.54
CHMP2A-208ENST00000601220 PRR27Q6MZM9 219 aa11.7□□□□□ -0.54
CHMP2A-208ENST00000601220 RPL36ALQ969Q0 106 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-208ENST00000601220 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
CHMP2A-208ENST00000601220 Q0VG73 95 aa11.69□□□□□ -0.54
CHMP2A-208ENST00000601220 NEXN-AS1Q8NBZ9 246 aa11.69□□□□□ -0.54
CHMP2A-208ENST00000601220 RAB4BP61018 213 aa11.68□□□□□ -0.54
CHMP2A-208ENST00000601220 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
CHMP2A-208ENST00000601220 PKHD1L1Q86WI1 4243 aa11.68□□□□□ -0.54
CHMP2A-208ENST00000601220 RPL19P84098 196 aaKnown RBP11.67□□□□□ -0.54
CHMP2A-208ENST00000601220 OR10AG1Q8NH19 301 aa11.67□□□□□ -0.54
CHMP2A-208ENST00000601220 MLST8Q9BVC4 326 aa11.67□□□□□ -0.54
CHMP2A-208ENST00000601220 SSBP4Q9BWG4 385 aaPredicted RBP11.67□□□□□ -0.54
CHMP2A-208ENST00000601220 BATF3Q9NR55 127 aa11.67□□□□□ -0.54
CHMP2A-208ENST00000601220 PAGE4O60829 102 aa11.66□□□□□ -0.54
CHMP2A-208ENST00000601220 AKR1C3P42330 323 aa11.66□□□□□ -0.54
CHMP2A-208ENST00000601220 MPV17L2Q567V2 206 aa11.66□□□□□ -0.54
CHMP2A-208ENST00000601220 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
CHMP2A-208ENST00000601220 ARPC5O15511 151 aa11.65□□□□□ -0.54
CHMP2A-208ENST00000601220 SNAI2O43623 268 aa11.65□□□□□ -0.54
CHMP2A-208ENST00000601220 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
CHMP2A-208ENST00000601220 CXCL1P09341 107 aa11.65□□□□□ -0.54
CHMP2A-208ENST00000601220 KCNIP4Q6PIL6 250 aa11.65□□□□□ -0.54
CHMP2A-208ENST00000601220 C1orf43Q9BWL3 253 aa11.65□□□□□ -0.54
CHMP2A-208ENST00000601220 NTM-AS1Q6ZSK4 140 aa11.64□□□□□ -0.55
CHMP2A-208ENST00000601220 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
CHMP2A-208ENST00000601220 STOML3Q8TAV4 291 aa11.64□□□□□ -0.55
CHMP2A-208ENST00000601220 MBD3L1Q8WWY6 194 aa11.64□□□□□ -0.55
CHMP2A-208ENST00000601220 OXTP01178 125 aa11.63□□□□□ -0.55
CHMP2A-208ENST00000601220 C14orf177Q52M58 125 aa11.63□□□□□ -0.55
CHMP2A-208ENST00000601220 KRTAP26-1Q6PEX3 210 aa11.63□□□□□ -0.55
CHMP2A-208ENST00000601220 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
CHMP2A-208ENST00000601220 MUC21A0A0G2JKD1 596 aa11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 MUC21A0A140T8X8 626 aa11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 SCO2A0A1W2PP80 73 aa11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 USP17L23D6RBM5 183 aa11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 OR5AL1P0C617 328 aa11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 ZNF56Q15929 161 aa11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 ZNF471Q9BX82 626 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
CHMP2A-208ENST00000601220 VAX2Q9UIW0 290 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms