RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 TMSB15BA0A087X1C1 80 aa10□□□□□ -0.81
SHKBP1-226ENST00000600791 AKR1C3P42330 323 aa10□□□□□ -0.81
SHKBP1-226ENST00000600791 HAMPP81172 84 aa10□□□□□ -0.81
SHKBP1-226ENST00000600791 KCNRGQ8N5I3 272 aa10□□□□□ -0.81
SHKBP1-226ENST00000600791 FRZBQ92765 325 aa10□□□□□ -0.81
SHKBP1-226ENST00000600791 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
SHKBP1-226ENST00000600791 MYCBP2O75592 4640 aa10□□□□□ -0.81
SHKBP1-226ENST00000600791 SRRM2Q9UQ35 2752 aaKnown RBP10□□□□□ -0.81
SHKBP1-226ENST00000600791 DNAH8Q96JB1 4490 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 A0A087WWC5 75 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 A0A087WWL8 130 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 M0R381 172 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 PAGE4O60829 102 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 TPT1P13693 172 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 WFDC2Q14508 124 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 ZNF345Q14585 488 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 TMEM70Q9BUB7 260 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 TM2D2Q9BX73 214 aa9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-226ENST00000600791 SMR3BP02814 79 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-226ENST00000600791 INAFM2P0DMQ5 153 aa9.98□□□□□ -0.81
SHKBP1-226ENST00000600791 ZFP82Q8N141 532 aa9.98□□□□□ -0.81
SHKBP1-226ENST00000600791 VPS13BQ7Z7G8 4022 aa9.98□□□□□ -0.81
SHKBP1-226ENST00000600791 TRAV8-3A0A0A6YYJ7 113 aa9.97□□□□□ -0.81
SHKBP1-226ENST00000600791 A0A1B0GV50 99 aa9.97□□□□□ -0.81
SHKBP1-226ENST00000600791 SEC11BP0C7V7 166 aa9.97□□□□□ -0.81
SHKBP1-226ENST00000600791 FAM213BQ8TBF2 198 aa9.97□□□□□ -0.81
SHKBP1-226ENST00000600791 SFT2D1Q8WV19 159 aa9.97□□□□□ -0.81
SHKBP1-226ENST00000600791 MBD3L1Q8WWY6 194 aa9.97□□□□□ -0.81
SHKBP1-226ENST00000600791 SCO2A0A1W2PP80 73 aa9.96□□□□□ -0.82
SHKBP1-226ENST00000600791 UMAD1C9J7I0 102 aa9.96□□□□□ -0.82
SHKBP1-226ENST00000600791 TOR2AQ5JU69 321 aa9.96□□□□□ -0.82
SHKBP1-226ENST00000600791 FLG2Q5D862 2391 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-226ENST00000600791 LECT2O14960 151 aa9.95□□□□□ -0.82
SHKBP1-226ENST00000600791 NIT1Q86X76 327 aa9.95□□□□□ -0.82
SHKBP1-226ENST00000600791 ZNF471Q9BX82 626 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-226ENST00000600791 URGCP-MRPS24S4R325 110 aa9.95□□□□□ -0.82
SHKBP1-226ENST00000600791 TRBV10-1A0A0K0K1A3 114 aa9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 HMSDA8MTL9 139 aa9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 BCL2L11O43521 198 aa9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 S100A9P06702 114 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 RPL19P84098 196 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 OR10AG1Q8NH19 301 aa9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 DNAJC30Q96LL9 226 aa9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 MLST8Q9BVC4 326 aa9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
SHKBP1-226ENST00000600791 A0A0D9SG52 128 aa9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 KANTRA0A1W2PQU2 76 aa9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 PFDN1O60925 122 aa9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 CXCL1P09341 107 aa9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 UBE2D3P61077 147 aa9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 UBE2D2P62837 147 aa9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 RPL36AP83881 106 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 RPL36ALQ969Q0 106 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-226ENST00000600791 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
SHKBP1-226ENST00000600791 FAM229AH3BQW9 127 aa9.92□□□□□ -0.82
SHKBP1-226ENST00000600791 C1QBP02746 253 aa9.92□□□□□ -0.82
SHKBP1-226ENST00000600791 BAGE2Q86Y30 109 aa9.92□□□□□ -0.82
SHKBP1-226ENST00000600791 BAALCQ8WXS3 180 aa9.92□□□□□ -0.82
SHKBP1-226ENST00000600791 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
SHKBP1-226ENST00000600791 COX11Q9Y6N1 276 aa9.92□□□□□ -0.82
SHKBP1-226ENST00000600791 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-226ENST00000600791 H2AFB1P0C5Y9 115 aa9.91□□□□□ -0.82
SHKBP1-226ENST00000600791 ZNF56Q15929 161 aa9.91□□□□□ -0.82
SHKBP1-226ENST00000600791 OR10G8Q8NGN5 311 aa9.91□□□□□ -0.82
SHKBP1-226ENST00000600791 RMI2Q96E14 147 aa9.91□□□□□ -0.82
SHKBP1-226ENST00000600791 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
SHKBP1-226ENST00000600791 IGKV2D-24A0A075B6R9 120 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 A0A087WX48 190 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 SNAI2O43623 268 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 RAB4BP61018 213 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 PRR27Q6MZM9 219 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 Q6ZSA8 131 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 UBE2WQ96B02 151 aa9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 SSBP4Q9BWG4 385 aaPredicted RBP9.9□□□□□ -0.82
SHKBP1-226ENST00000600791 MUC21A0A0G2JKD1 596 aa9.89□□□□□ -0.83
SHKBP1-226ENST00000600791 MUC21A0A140T8X8 626 aa9.89□□□□□ -0.83
SHKBP1-226ENST00000600791 OR5AL1P0C617 328 aa9.89□□□□□ -0.83
SHKBP1-226ENST00000600791 RPL35P42766 123 aaKnown RBP9.89□□□□□ -0.83
SHKBP1-226ENST00000600791 EIF5AP63241 154 aaKnown RBP9.89□□□□□ -0.83
SHKBP1-226ENST00000600791 Q6ZNX1 250 aa9.89□□□□□ -0.83
SHKBP1-226ENST00000600791 TMUB2Q71RG4 321 aa9.89□□□□□ -0.83
SHKBP1-226ENST00000600791 TRBV6-8A0A0A6YYG3 113 aa9.88□□□□□ -0.83
SHKBP1-226ENST00000600791 ELOBQ15370 118 aa9.88□□□□□ -0.83
SHKBP1-226ENST00000600791 SPANXN1Q5VSR9 72 aa9.88□□□□□ -0.83
SHKBP1-226ENST00000600791 KCNIP4Q6PIL6 250 aa9.88□□□□□ -0.83
SHKBP1-226ENST00000600791 ATRAIDQ6UW56 229 aa9.88□□□□□ -0.83
SHKBP1-226ENST00000600791 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
SHKBP1-226ENST00000600791 CCL20P78556 96 aa9.87□□□□□ -0.83
SHKBP1-226ENST00000600791 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
SHKBP1-226ENST00000600791 C11orf52Q96A22 123 aa9.87□□□□□ -0.83
SHKBP1-226ENST00000600791 MANBALQ9NQG1 85 aa9.87□□□□□ -0.83
SHKBP1-226ENST00000600791 GNG13Q9P2W3 67 aa9.87□□□□□ -0.83
SHKBP1-226ENST00000600791 TMEM262E9PQX1 116 aa9.86□□□□□ -0.83
SHKBP1-226ENST00000600791 SSTP61278 116 aa9.86□□□□□ -0.83
SHKBP1-226ENST00000600791 MPV17L2Q567V2 206 aa9.86□□□□□ -0.83
SHKBP1-226ENST00000600791 Q8N976 141 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms