RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 RAB5CP51148 216 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 HNRNPA3P51991 378 aaKnown RBP10.25□□□□□ -0.77
LIG1-214ENST00000597146 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 ZC2HC1AQ96GY0 325 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 C9orf85Q96MD7 179 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 GNG13Q9P2W3 67 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 hCG_2014768A0A024R1R8 64 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 IGKV3D-20A0A0C4DH25 116 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 A8MWV9 139 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 BAGE2Q86Y30 109 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 TCTE3Q8IZS6 198 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 PTH2Q96A98 100 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
LIG1-214ENST00000597146 TRBV6-1A0A0K0K1D8 114 aa10.23□□□□□ -0.77
LIG1-214ENST00000597146 LOC100131303A0A0U1RQF7 123 aa10.23□□□□□ -0.77
LIG1-214ENST00000597146 KRBOX1C9JBD0 128 aa10.23□□□□□ -0.77
LIG1-214ENST00000597146 H3BVH4 76 aa10.23□□□□□ -0.77
LIG1-214ENST00000597146 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
LIG1-214ENST00000597146 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
LIG1-214ENST00000597146 GATA1P15976 413 aaPredicted RBP10.23□□□□□ -0.77
LIG1-214ENST00000597146 RHOHQ15669 191 aa10.23□□□□□ -0.77
LIG1-214ENST00000597146 TRAV8-6A0A0B4J262 113 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 TRBV6-4A0A1B0GX49 114 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 LTAP01374 205 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
LIG1-214ENST00000597146 CRIP1P50238 77 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 Q6ZNX1 250 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 AKAP14Q86UN6 197 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 SLC25A29Q8N8R3 303 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 MANBALQ9NQG1 85 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 IL36BQ9NZH7 164 aa10.22□□□□□ -0.77
LIG1-214ENST00000597146 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.77
LIG1-214ENST00000597146 SCO2A0A1W2PP80 73 aa10.21□□□□□ -0.77
LIG1-214ENST00000597146 IFNA1P01562 189 aa10.21□□□□□ -0.77
LIG1-214ENST00000597146 SLC51BQ86UW2 128 aa10.21□□□□□ -0.77
LIG1-214ENST00000597146 M0R381 172 aa10.2□□□□□ -0.78
LIG1-214ENST00000597146 LECT2O14960 151 aa10.2□□□□□ -0.78
LIG1-214ENST00000597146 ZNF674Q2M3X9 581 aa10.2□□□□□ -0.78
LIG1-214ENST00000597146 OR10J3Q5JRS4 329 aa10.2□□□□□ -0.78
LIG1-214ENST00000597146 PRR27Q6MZM9 219 aa10.2□□□□□ -0.78
LIG1-214ENST00000597146 CIRBP-AS1Q8TBR5 109 aa10.2□□□□□ -0.78
LIG1-214ENST00000597146 DAZAP1Q96EP5 407 aaKnown RBP10.2□□□□□ -0.78
LIG1-214ENST00000597146 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
LIG1-214ENST00000597146 IBA57-AS1B1ANH7 110 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 SULT1A2P50226 295 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 CCL20P78556 96 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 PIK3CD-AS1Q5SR53 167 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 FAM74A4Q5TZK3 123 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 ZFP2Q6ZN57 461 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 COX8CQ7Z4L0 72 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 ATP6V0E2Q8NHE4 81 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 CHAC1Q9BUX1 264 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 PARLQ9H300 379 aa10.19□□□□□ -0.78
LIG1-214ENST00000597146 TRAV1-1A0A0B4J248 108 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 GAGE12JA6NER3 117 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 IGLV2-8P01709 118 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 GAGE1Q13065 139 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 GAGE4Q13068 117 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 GAGE5Q13069 117 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 GAGE13Q4V321 117 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 DNLZQ5SXM8 178 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 ZFP82Q8N141 532 aa10.18□□□□□ -0.78
LIG1-214ENST00000597146 IGHV3-38A0A0C4DH36 116 aa10.17□□□□□ -0.78
LIG1-214ENST00000597146 RHODO00212 210 aa10.17□□□□□ -0.78
LIG1-214ENST00000597146 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
LIG1-214ENST00000597146 SSTP61278 116 aa10.17□□□□□ -0.78
LIG1-214ENST00000597146 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
LIG1-214ENST00000597146 JPT2Q9H910 190 aa10.17□□□□□ -0.78
LIG1-214ENST00000597146 MED9Q9NWA0 146 aa10.17□□□□□ -0.78
LIG1-214ENST00000597146 A0A087WWL8 130 aa10.16□□□□□ -0.78
LIG1-214ENST00000597146 RPL37AP61513 92 aaKnown RBP10.16□□□□□ -0.78
LIG1-214ENST00000597146 LINC01556Q5JQF7 62 aa10.16□□□□□ -0.78
LIG1-214ENST00000597146 GTSF1LQ9H1H1 148 aa10.16□□□□□ -0.78
LIG1-214ENST00000597146 PDE6DO43924 150 aa10.15□□□□□ -0.78
LIG1-214ENST00000597146 GNG4P50150 75 aa10.15□□□□□ -0.78
LIG1-214ENST00000597146 TIRAPP58753 221 aa10.15□□□□□ -0.78
LIG1-214ENST00000597146 SPANXN1Q5VSR9 72 aa10.15□□□□□ -0.78
LIG1-214ENST00000597146 SFRP2Q96HF1 295 aa10.15□□□□□ -0.78
LIG1-214ENST00000597146 SAMD10Q9BYL1 202 aa10.15□□□□□ -0.78
LIG1-214ENST00000597146 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
LIG1-214ENST00000597146 IGHV3-33P01772 117 aa10.14□□□□□ -0.79
LIG1-214ENST00000597146 IGHV3-30-3P0DP02 117 aa10.14□□□□□ -0.79
LIG1-214ENST00000597146 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
LIG1-214ENST00000597146 RPL19P84098 196 aaKnown RBP10.14□□□□□ -0.79
LIG1-214ENST00000597146 LELP1Q5T871 98 aa10.14□□□□□ -0.79
LIG1-214ENST00000597146 VAX2Q9UIW0 290 aa10.14□□□□□ -0.79
LIG1-214ENST00000597146 RAB19A4D1S5 217 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 F5H697 171 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 SMIM17P0DL12 118 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
LIG1-214ENST00000597146 BLOC1S1P78537 153 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 MEF2BQ02080 365 aaPredicted RBP10.13□□□□□ -0.79
LIG1-214ENST00000597146 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 MLST8Q9BVC4 326 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 BIN3Q9NQY0 253 aa10.13□□□□□ -0.79
LIG1-214ENST00000597146 A0A087WWC5 75 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms