RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 C9JCJ5 164 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 K7EN84 100 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 NXPH4O95158 308 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 TYMSP04818 313 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 MGST1P10620 155 aaKnown RBP7.12□□□□□ -1.27
LIG1-213ENST00000596672 ZNF415Q09FC8 603 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 BAGE2Q86Y30 109 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 TMEM75Q8N9X5 138 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 PRO0255Q9UI72 69 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 HHLA3Q9XRX5 114 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 LENEPQ9Y5L5 61 aa7.12□□□□□ -1.27
LIG1-213ENST00000596672 K7EQD1 137 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 K7EQM0 130 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 IGLV2-8P01709 118 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 ELOBQ15370 118 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 PRNTQ86SH4 94 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 WFDC10BQ8IUB3 73 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 FMC1Q96HJ9 113 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 NAGKQ9UJ70 344 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 ICOSQ9Y6W8 199 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
LIG1-213ENST00000596672 TRBV24-1A0A075B6N3 115 aa7.1□□□□□ -1.27
LIG1-213ENST00000596672 A0A1W2PPQ1 181 aa7.1□□□□□ -1.27
LIG1-213ENST00000596672 SIVA1O15304 175 aa7.1□□□□□ -1.27
LIG1-213ENST00000596672 BTF3P20290 206 aaKnown RBP7.1□□□□□ -1.27
LIG1-213ENST00000596672 Q6ZSN1 163 aa7.1□□□□□ -1.27
LIG1-213ENST00000596672 Q9UF83 564 aa7.1□□□□□ -1.27
LIG1-213ENST00000596672 PSG8Q9UQ74 426 aa7.1□□□□□ -1.27
LIG1-213ENST00000596672 LY96Q9Y6Y9 160 aa7.1□□□□□ -1.27
LIG1-213ENST00000596672 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
LIG1-213ENST00000596672 PPP1R2P9O14990 202 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 CDK2AP2O75956 126 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 GCGP01275 180 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 DNAH10OSP0CZ25 163 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 GYPEP15421 78 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 TTC32Q5I0X7 151 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 Q86TA4 180 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 ARL6IP6Q8N6S5 226 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 ANAPC16Q96DE5 110 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 SFRP2Q96HF1 295 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 SPXQ9BT56 116 aa7.09□□□□□ -1.27
LIG1-213ENST00000596672 SRRM2Q9UQ35 2752 aaKnown RBP7.08□□□□□ -1.28
LIG1-213ENST00000596672 TRGV4A0A0C4DH28 118 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 TRBV6-1A0A0K0K1D8 114 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 SERTM2A0A1B0GWG4 89 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 LTAP01374 205 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
LIG1-213ENST00000596672 GATA1P15976 413 aaPredicted RBP7.08□□□□□ -1.28
LIG1-213ENST00000596672 NDUFA6P56556 154 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 ERVFC1-1P60608 527 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 MRPL23Q16540 153 aaKnown RBP7.08□□□□□ -1.28
LIG1-213ENST00000596672 PRR27Q6MZM9 219 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 FAM159AQ6UWV7 190 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 OR10G8Q8NGN5 311 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 C9orf85Q96MD7 179 aa7.08□□□□□ -1.28
LIG1-213ENST00000596672 RNASE7Q9H1E1 156 aaKnown RBP7.08□□□□□ -1.28
LIG1-213ENST00000596672 TRGV11A0A075B6L2 103 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 TRAV4A0A0B4J268 109 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 TRAV21A0A0B4J279 112 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 IGKV3D-20A0A0C4DH25 116 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 M0R2P5 195 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 GATCO43716 136 aaKnown RBP7.07□□□□□ -1.28
LIG1-213ENST00000596672 CRIP1P50238 77 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 NEGR1Q7Z3B1 354 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 MLST8Q9BVC4 326 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 ZFP30Q9Y2G7 519 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 URGCP-MRPS24S4R325 110 aa7.07□□□□□ -1.28
LIG1-213ENST00000596672 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 RS1O15537 224 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 CFAP126Q5VTH2 177 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 KCNIP4Q6PIL6 250 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 Q8N3U1 123 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 MAPKAPK5-AS1Q8N8E1 139 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 NUDT10Q8NFP7 164 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 NUDT11Q96G61 164 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 ZC2HC1AQ96GY0 325 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 JPT2Q9H910 190 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
LIG1-213ENST00000596672 TGIF2-C20orf24A0A0A6YYL0 155 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 FBLL1A6NHQ2 334 aaKnown RBP7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 CXCL1P09341 107 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 XGP55808 180 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 SLAQ13239 276 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
LIG1-213ENST00000596672 SAPCD1Q5SSQ6 148 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 SLC25A29Q8N8R3 303 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 OR4C5Q8NGB2 326 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
LIG1-213ENST00000596672 DAZAP1Q96EP5 407 aaKnown RBP7.05□□□□□ -1.28
LIG1-213ENST00000596672 SMIM12Q96EX1 92 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms