RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 Q6ZSN1 163 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 SYT8Q8NBV8 401 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 OR10AG1Q8NH19 301 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 OCC1Q8TAD7 63 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 PHLDA3Q9Y5J5 127 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 FAT1Q14517 4588 aa10.91□□□□□ -0.66
USHBP1-205ENST00000595993 A8MWV9 139 aa10.91□□□□□ -0.66
USHBP1-205ENST00000595993 K7EQD1 137 aa10.91□□□□□ -0.66
USHBP1-205ENST00000595993 SNAI2O43623 268 aa10.91□□□□□ -0.66
USHBP1-205ENST00000595993 CEBPGP53567 150 aa10.91□□□□□ -0.66
USHBP1-205ENST00000595993 SLC25A29Q8N8R3 303 aa10.91□□□□□ -0.66
USHBP1-205ENST00000595993 OR2D3Q8NGH3 330 aa10.91□□□□□ -0.66
USHBP1-205ENST00000595993 MUC21A0A0G2JKD1 596 aa10.9□□□□□ -0.66
USHBP1-205ENST00000595993 MUC21A0A140T8X8 626 aa10.9□□□□□ -0.66
USHBP1-205ENST00000595993 CIDEAO60543 219 aa10.9□□□□□ -0.66
USHBP1-205ENST00000595993 NDUFS6O75380 124 aaKnown RBP10.9□□□□□ -0.66
USHBP1-205ENST00000595993 NXPH4O95158 308 aa10.9□□□□□ -0.66
USHBP1-205ENST00000595993 SRSF3P84103 164 aaKnown RBP10.9□□□□□ -0.66
USHBP1-205ENST00000595993 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
USHBP1-205ENST00000595993 ZFP82Q8N141 532 aa10.9□□□□□ -0.66
USHBP1-205ENST00000595993 DAZAP1Q96EP5 407 aaKnown RBP10.9□□□□□ -0.66
USHBP1-205ENST00000595993 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
USHBP1-205ENST00000595993 SSBP4Q9BWG4 385 aaPredicted RBP10.9□□□□□ -0.66
USHBP1-205ENST00000595993 MRPS16Q9Y3D3 137 aaKnown RBP10.9□□□□□ -0.66
USHBP1-205ENST00000595993 A0A087WWL8 130 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 C9JQL5 133 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 P01737 135 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 OR5AL1P0C617 328 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 IGLC6P0CF74 106 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 ZFP2Q6ZN57 461 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
USHBP1-205ENST00000595993 RNASE7Q9H1E1 156 aaKnown RBP10.89□□□□□ -0.67
USHBP1-205ENST00000595993 TRBV6-4A0A1B0GX49 114 aa10.88□□□□□ -0.67
USHBP1-205ENST00000595993 CRYGDP07320 174 aa10.88□□□□□ -0.67
USHBP1-205ENST00000595993 SRIP30626 198 aa10.88□□□□□ -0.67
USHBP1-205ENST00000595993 Q6ZRN7 208 aaPredicted RBP10.88□□□□□ -0.67
USHBP1-205ENST00000595993 BIN3Q9NQY0 253 aa10.88□□□□□ -0.67
USHBP1-205ENST00000595993 VPS13BQ7Z7G8 4022 aa10.88□□□□□ -0.67
USHBP1-205ENST00000595993 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
USHBP1-205ENST00000595993 RHOHQ15669 191 aa10.87□□□□□ -0.67
USHBP1-205ENST00000595993 FAM74A4Q5TZK3 123 aa10.87□□□□□ -0.67
USHBP1-205ENST00000595993 LYPD5Q6UWN5 251 aa10.87□□□□□ -0.67
USHBP1-205ENST00000595993 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
USHBP1-205ENST00000595993 C14orf178Q8N769 122 aaPredicted RBP10.87□□□□□ -0.67
USHBP1-205ENST00000595993 SMIM7Q9BQ49 75 aa10.87□□□□□ -0.67
USHBP1-205ENST00000595993 Q9UF83 564 aa10.87□□□□□ -0.67
USHBP1-205ENST00000595993 RHODO00212 210 aa10.86□□□□□ -0.67
USHBP1-205ENST00000595993 SSTP61278 116 aa10.86□□□□□ -0.67
USHBP1-205ENST00000595993 FER1L6-AS1Q8NA97 138 aa10.86□□□□□ -0.67
USHBP1-205ENST00000595993 PRADC1Q9BSG0 188 aa10.86□□□□□ -0.67
USHBP1-205ENST00000595993 TPPP3Q9BW30 176 aa10.86□□□□□ -0.67
USHBP1-205ENST00000595993 RPP21Q9H633 154 aaKnown RBP10.86□□□□□ -0.67
USHBP1-205ENST00000595993 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
USHBP1-205ENST00000595993 DMBT1Q9UGM3 2413 aaPredicted RBP10.85□□□□□ -0.67
USHBP1-205ENST00000595993 ZNF727A8MUV8 499 aa10.85□□□□□ -0.67
USHBP1-205ENST00000595993 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
USHBP1-205ENST00000595993 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
USHBP1-205ENST00000595993 LINC00694P0DN24 101 aa10.84□□□□□ -0.67
USHBP1-205ENST00000595993 IFITM2Q01629 132 aa10.84□□□□□ -0.67
USHBP1-205ENST00000595993 LINC01551Q86U37 167 aa10.84□□□□□ -0.67
USHBP1-205ENST00000595993 MSRB1Q9NZV6 116 aa10.84□□□□□ -0.67
USHBP1-205ENST00000595993 XKRY2A2RUG3 117 aa10.83□□□□□ -0.68
USHBP1-205ENST00000595993 LINC00315P59091 139 aa10.83□□□□□ -0.68
USHBP1-205ENST00000595993 PEA15Q15121 130 aa10.83□□□□□ -0.68
USHBP1-205ENST00000595993 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
USHBP1-205ENST00000595993 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
USHBP1-205ENST00000595993 KIF25-AS1Q9Y6Z4 181 aa10.83□□□□□ -0.68
USHBP1-205ENST00000595993 SRRM2Q9UQ35 2752 aaKnown RBP10.82□□□□□ -0.68
USHBP1-205ENST00000595993 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
USHBP1-205ENST00000595993 CTRLP40313 264 aa10.82□□□□□ -0.68
USHBP1-205ENST00000595993 GAGE1Q13065 139 aa10.82□□□□□ -0.68
USHBP1-205ENST00000595993 GAGE4Q13068 117 aa10.82□□□□□ -0.68
USHBP1-205ENST00000595993 GAGE5Q13069 117 aa10.82□□□□□ -0.68
USHBP1-205ENST00000595993 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
USHBP1-205ENST00000595993 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
USHBP1-205ENST00000595993 EPM2AB3EWF7 344 aa10.81□□□□□ -0.68
USHBP1-205ENST00000595993 GATCO43716 136 aaKnown RBP10.81□□□□□ -0.68
USHBP1-205ENST00000595993 SH2D6Q7Z4S9 175 aa10.81□□□□□ -0.68
USHBP1-205ENST00000595993 WFDC10BQ8IUB3 73 aa10.81□□□□□ -0.68
USHBP1-205ENST00000595993 PGPEP1Q9NXJ5 209 aa10.81□□□□□ -0.68
USHBP1-205ENST00000595993 XGP55808 180 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 TIRAPP58753 221 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 ERVFC1-1P60608 527 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 RPL23P62829 140 aaKnown RBP10.8□□□□□ -0.68
USHBP1-205ENST00000595993 CACNG7P62955 275 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 ZNF56Q15929 161 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 FAM74A3Q4VXF1 159 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 AP1S3Q96PC3 154 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 SMDT1Q9H4I9 107 aa10.8□□□□□ -0.68
USHBP1-205ENST00000595993 F2Z2F3 143 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 SIVA1O15304 175 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 RAB4BP61018 213 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 RAB14P61106 215 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 TMEM241Q24JQ0 296 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 CDPF1Q6NVV7 123 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 ATP6V0E2Q8NHE4 81 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
USHBP1-205ENST00000595993 NTF3P20783 257 aa10.78□□□□□ -0.68
USHBP1-205ENST00000595993 CT83Q5H943 113 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms