RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 RHODO00212 210 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 IGHV3-53P01767 116 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 S100A8P05109 93 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 SMIM17P0DL12 118 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 CAMPP49913 170 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 NANOS2P60321 138 aaKnown RBP7.69□□□□□ -1.18
USE1-204ENST00000594399 FAM74A4Q5TZK3 123 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 CFAP126Q5VTH2 177 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 JPT2Q9H910 190 aa7.69□□□□□ -1.18
USE1-204ENST00000594399 A0A087WWL8 130 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 CIDEAO60543 219 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 ATP5G1P05496 136 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 EVI2AP22794 236 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 ELOBQ15370 118 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 Q6ZTC4 211 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 C14orf178Q8N769 122 aaPredicted RBP7.68□□□□□ -1.18
USE1-204ENST00000594399 POM121L12Q8N7R1 296 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 ZNF479Q96JC4 524 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 DPH3P1Q9H4G8 78 aa7.68□□□□□ -1.18
USE1-204ENST00000594399 TGIF2-C20orf24A0A0A6YYL0 155 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 SCO1O75880 301 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 CRYGDP07320 174 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 MGPP08493 103 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 UFSP1Q6NVU6 142 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 RASL11AQ6T310 242 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 ZFP2Q6ZN57 461 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 YPEL4Q96NS1 127 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 SAMD10Q9BYL1 202 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 TMEM191AQ9H0A3 160 aa7.67□□□□□ -1.18
USE1-204ENST00000594399 TRBV24-1A0A075B6N3 115 aa7.66□□□□□ -1.18
USE1-204ENST00000594399 IGHV3-73A0A0B4J1V6 119 aa7.66□□□□□ -1.18
USE1-204ENST00000594399 TRGV4A0A0C4DH28 118 aa7.66□□□□□ -1.18
USE1-204ENST00000594399 HTN3P15516 51 aa7.66□□□□□ -1.18
USE1-204ENST00000594399 ZNF56Q15929 161 aa7.66□□□□□ -1.18
USE1-204ENST00000594399 GATD1Q8NB37 220 aa7.66□□□□□ -1.18
USE1-204ENST00000594399 KIF25-AS1Q9Y6Z4 181 aa7.66□□□□□ -1.18
USE1-204ENST00000594399 TRAV10A0A0B4J240 114 aa7.65□□□□□ -1.18
USE1-204ENST00000594399 F5H768 121 aa7.65□□□□□ -1.18
USE1-204ENST00000594399 C3orf84H3BNL1 204 aa7.65□□□□□ -1.18
USE1-204ENST00000594399 HOXA5P20719 270 aa7.65□□□□□ -1.18
USE1-204ENST00000594399 RAB4BP61018 213 aa7.65□□□□□ -1.18
USE1-204ENST00000594399 FHL2Q14192 279 aa7.65□□□□□ -1.18
USE1-204ENST00000594399 COX19Q49B96 90 aa7.65□□□□□ -1.18
USE1-204ENST00000594399 DNAH7Q8WXX0 4024 aa7.65□□□□□ -1.19
USE1-204ENST00000594399 DEFB131BA0A096LNP1 70 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 F5H697 171 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 GATA1P15976 413 aaPredicted RBP7.64□□□□□ -1.19
USE1-204ENST00000594399 LINC00315P59091 139 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 SLAQ13239 276 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 TMEM136Q6ZRR5 245 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 AMN1Q8IY45 258 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 FAM210BQ96KR6 192 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 GNB1LQ9BYB4 327 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 NACAE9PAV3 2078 aa7.64□□□□□ -1.19
USE1-204ENST00000594399 K7EQD1 137 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 HLA-DQA1P01909 254 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 MT-ND6P03923 174 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 RHOHQ15669 191 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 FAM104BQ5XKR9 115 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 SUMO4Q6EEV6 95 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 MUC7Q8TAX7 377 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 PHLDA1Q8WV24 401 aaPredicted RBP7.63□□□□□ -1.19
USE1-204ENST00000594399 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 PRO0255Q9UI72 69 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
USE1-204ENST00000594399 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
USE1-204ENST00000594399 RAB4AP20338 218 aa7.62□□□□□ -1.19
USE1-204ENST00000594399 CRYBA4P53673 196 aa7.62□□□□□ -1.19
USE1-204ENST00000594399 Q6ZSN1 163 aa7.62□□□□□ -1.19
USE1-204ENST00000594399 MRAP2Q96G30 205 aa7.62□□□□□ -1.19
USE1-204ENST00000594399 TRAV26-1A0A087WT03 109 aa7.61□□□□□ -1.19
USE1-204ENST00000594399 TRAV26-2A0A0B4J265 109 aa7.61□□□□□ -1.19
USE1-204ENST00000594399 NUPR2A6NF83 97 aa7.61□□□□□ -1.19
USE1-204ENST00000594399 H7C1H1 209 aa7.61□□□□□ -1.19
USE1-204ENST00000594399 SLC25A29Q8N8R3 303 aa7.61□□□□□ -1.19
USE1-204ENST00000594399 FRZBQ92765 325 aa7.61□□□□□ -1.19
USE1-204ENST00000594399 PRADC1Q9BSG0 188 aa7.61□□□□□ -1.19
USE1-204ENST00000594399 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
USE1-204ENST00000594399 A0A0J9YY99 117 aa7.6□□□□□ -1.19
USE1-204ENST00000594399 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
USE1-204ENST00000594399 COLCA2A8K830 154 aa7.6□□□□□ -1.19
USE1-204ENST00000594399 M0QY20 66 aa7.6□□□□□ -1.19
USE1-204ENST00000594399 PAX4O43316 350 aa7.6□□□□□ -1.19
USE1-204ENST00000594399 NCR2O95944 276 aa7.6□□□□□ -1.19
USE1-204ENST00000594399 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
USE1-204ENST00000594399 VSIG2Q96IQ7 327 aa7.6□□□□□ -1.19
USE1-204ENST00000594399 MRPL18Q9H0U6 180 aaKnown RBP7.6□□□□□ -1.19
USE1-204ENST00000594399 D6R8Y8 96 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 H3BNG1 76 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 APCSP02743 223 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 PPBPP02775 128 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 P0DMU3 169 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 FAM231AP0DMU4 169 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 FAM231CP0DMU5 169 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 GYPEP15421 78 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 RAB5AP20339 215 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 CKS2P33552 79 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 CEMP1Q6PRD7 247 aaPredicted RBP7.59□□□□□ -1.19
USE1-204ENST00000594399 ORMDL3Q8N138 153 aa7.59□□□□□ -1.19
USE1-204ENST00000594399 TRAPPC1Q9Y5R8 145 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms