RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 LINC00315P59091 139 aa14.99□□□□□ -0.01
PNKP-203ENST00000593946 PLAC8L1A1L4L8 177 aa14.98□□□□□ -0.01
PNKP-203ENST00000593946 SMKR1H3BMG3 65 aa14.98□□□□□ -0.01
PNKP-203ENST00000593946 AKR1D1P51857 326 aa14.98□□□□□ -0.01
PNKP-203ENST00000593946 RIPPLY3P57055 190 aa14.98□□□□□ -0.01
PNKP-203ENST00000593946 IQCJQ1A5X6 159 aa14.98□□□□□ -0.01
PNKP-203ENST00000593946 POM121L12Q8N7R1 296 aa14.98□□□□□ -0.01
PNKP-203ENST00000593946 PRELID3AQ96N28 172 aa14.98□□□□□ -0.01
PNKP-203ENST00000593946 NCR2O95944 276 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 SMIM17P0DL12 118 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 LINC00310P59036 64 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 BAGE3Q86Y29 109 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 A0A087WWL8 130 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 GAS8-AS1O95177 125 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 CRYGDP07320 174 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 DEFB135Q30KP9 77 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 MRAP2Q96G30 205 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 NDUFAF3Q9BU61 184 aa14.97□□□□□ -0.01
PNKP-203ENST00000593946 DAZ2Q13117 558 aaKnown RBP14.96□□□□□ -0.01
PNKP-203ENST00000593946 RASL10AQ92737 203 aa14.96□□□□□ -0.01
PNKP-203ENST00000593946 SAMD10Q9BYL1 202 aa14.96□□□□□ -0.01
PNKP-203ENST00000593946 X6R8D5 127 aa14.96□□□□□ -0.01
PNKP-203ENST00000593946 TRAV26-2A0A0B4J265 109 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 SERF1AO75920 110 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 MGPP08493 103 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 HIST3H2BBQ8N257 126 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 C12orf57Q99622 126 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 MRPL16Q9NX20 251 aaKnown RBP14.95□□□□□ -0.02
PNKP-203ENST00000593946 LAMTOR2Q9Y2Q5 125 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 SMIM9A6NGZ8 99 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 A8MWV9 139 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 NPYP01303 97 aa14.95□□□□□ -0.02
PNKP-203ENST00000593946 NUPR1O60356 82 aa14.94□□□□□ -0.02
PNKP-203ENST00000593946 GATA1P15976 413 aaPredicted RBP14.94□□□□□ -0.02
PNKP-203ENST00000593946 LGALS9BQ3B8N2 356 aa14.94□□□□□ -0.02
PNKP-203ENST00000593946 FAM74A4Q5TZK3 123 aa14.94□□□□□ -0.02
PNKP-203ENST00000593946 Q6ZWC4 215 aa14.94□□□□□ -0.02
PNKP-203ENST00000593946 SMIM6P0DI80 62 aa14.93□□□□□ -0.02
PNKP-203ENST00000593946 ESDP10768 282 aa14.93□□□□□ -0.02
PNKP-203ENST00000593946 KPRPQ5T749 579 aaPredicted RBP14.93□□□□□ -0.02
PNKP-203ENST00000593946 NRACQ8N912 160 aa14.93□□□□□ -0.02
PNKP-203ENST00000593946 TNFRSF6BO95407 300 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 PDZD11Q5EBL8 140 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 OVOL2Q9BRP0 275 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 NOP10Q9NPE3 64 aaKnown RBP14.92□□□□□ -0.02
PNKP-203ENST00000593946 TRGV1A0A0A0MS02 117 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 IFITM10A6NMD0 228 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 CFAP126Q5VTH2 177 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 UFSP1Q6NVU6 142 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 URB1-AS1Q96HZ7 61 aa14.92□□□□□ -0.02
PNKP-203ENST00000593946 PCP4L1A6NKN8 68 aa14.91□□□□□ -0.02
PNKP-203ENST00000593946 Q6ZTI0 123 aa14.91□□□□□ -0.02
PNKP-203ENST00000593946 RNF183Q96D59 192 aa14.91□□□□□ -0.02
PNKP-203ENST00000593946 SUMO4Q6EEV6 95 aa14.9□□□□□ -0.02
PNKP-203ENST00000593946 NIT1Q86X76 327 aa14.9□□□□□ -0.02
PNKP-203ENST00000593946 OR11H2Q8NH07 326 aa14.9□□□□□ -0.02
PNKP-203ENST00000593946 RS1O15537 224 aa14.89□□□□□ -0.03
PNKP-203ENST00000593946 ZNF56Q15929 161 aa14.89□□□□□ -0.03
PNKP-203ENST00000593946 F5H697 171 aa14.89□□□□□ -0.03
PNKP-203ENST00000593946 RHODO00212 210 aa14.88□□□□□ -0.03
PNKP-203ENST00000593946 S100A2P29034 98 aa14.88□□□□□ -0.03
PNKP-203ENST00000593946 RNASEKQ6P5S7 137 aaKnown RBP14.88□□□□□ -0.03
PNKP-203ENST00000593946 MAP1LC3AQ9H492 121 aa14.88□□□□□ -0.03
PNKP-203ENST00000593946 LOC389332A0A1B0GUA5 103 aa14.87□□□□□ -0.03
PNKP-203ENST00000593946 PRSS47A8MTI9 375 aa14.87□□□□□ -0.03
PNKP-203ENST00000593946 LINC00614P0C842 121 aa14.87□□□□□ -0.03
PNKP-203ENST00000593946 IFI27P40305 119 aaPredicted RBP14.87□□□□□ -0.03
PNKP-203ENST00000593946 CHCHD1Q96BP2 118 aaKnown RBP14.87□□□□□ -0.03
PNKP-203ENST00000593946 RPL39LQ96EH5 51 aaKnown RBP14.87□□□□□ -0.03
PNKP-203ENST00000593946 HIST1H2BLQ99880 126 aa14.87□□□□□ -0.03
PNKP-203ENST00000593946 PPP1R17O96001 155 aa14.86□□□□□ -0.03
PNKP-203ENST00000593946 ZFP2Q6ZN57 461 aa14.86□□□□□ -0.03
PNKP-203ENST00000593946 PRSS3P2Q8NHM4 247 aa14.86□□□□□ -0.03
PNKP-203ENST00000593946 M0QY20 66 aa14.86□□□□□ -0.03
PNKP-203ENST00000593946 MIFP14174 115 aa14.86□□□□□ -0.03
PNKP-203ENST00000593946 EMP1P54849 157 aa14.86□□□□□ -0.03
PNKP-203ENST00000593946 EDA2RQ9HAV5 297 aa14.86□□□□□ -0.03
PNKP-203ENST00000593946 IGHV3-73A0A0B4J1V6 119 aa14.85□□□□□ -0.03
PNKP-203ENST00000593946 TRAV4A0A0B4J268 109 aa14.85□□□□□ -0.03
PNKP-203ENST00000593946 PRB2P02812 416 aaPredicted RBP14.85□□□□□ -0.03
PNKP-203ENST00000593946 KRTAP21-3Q3LHN1 58 aa14.85□□□□□ -0.03
PNKP-203ENST00000593946 Q8NAQ8 132 aa14.85□□□□□ -0.03
PNKP-203ENST00000593946 TP53TG1Q9Y2A0 90 aa14.85□□□□□ -0.03
PNKP-203ENST00000593946 GAGE12BA1L429 117 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 HSBP1O75506 76 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 GAGE7O76087 117 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 GAGE12FP0CL80 117 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 GAGE12GP0CL81 117 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 GAGE12IP0CL82 117 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 FABP4P15090 132 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 OR4C5Q8NGB2 326 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 C20orf78Q9BR46 151 aa14.84□□□□□ -0.03
PNKP-203ENST00000593946 IGLV2-18A0A075B6J9 118 aa14.83□□□□□ -0.03
PNKP-203ENST00000593946 IGHV4-28A0A0C4DH34 117 aa14.83□□□□□ -0.03
PNKP-203ENST00000593946 K7EIL1 84 aa14.83□□□□□ -0.03
PNKP-203ENST00000593946 SUMO2P61956 95 aaKnown RBP14.83□□□□□ -0.03
PNKP-203ENST00000593946 FA2HQ7L5A8 372 aa14.83□□□□□ -0.03
PNKP-203ENST00000593946 LINC00612Q8N6U2 182 aa14.83□□□□□ -0.03
PNKP-203ENST00000593946 TMEM18Q96B42 140 aa14.83□□□□□ -0.03
PNKP-203ENST00000593946 NXT2Q9NPJ8 142 aaKnown RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms