RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ZC2HC1AQ96GY0 325 aa8.91□□□□□ -0.98
H3F3B-213ENST00000593254 TCEAL7Q9BRU2 100 aa8.91□□□□□ -0.98
H3F3B-213ENST00000593254 IL36BQ9NZH7 164 aa8.91□□□□□ -0.98
H3F3B-213ENST00000593254 ZFP30Q9Y2G7 519 aa8.91□□□□□ -0.98
H3F3B-213ENST00000593254 IGHV3-38A0A0C4DH36 116 aa8.9□□□□□ -0.98
H3F3B-213ENST00000593254 CRIP1P50238 77 aa8.9□□□□□ -0.98
H3F3B-213ENST00000593254 LINC01556Q5JQF7 62 aa8.9□□□□□ -0.98
H3F3B-213ENST00000593254 DNLZQ5SXM8 178 aa8.9□□□□□ -0.98
H3F3B-213ENST00000593254 ZFP2Q6ZN57 461 aa8.9□□□□□ -0.98
H3F3B-213ENST00000593254 FMC1Q96HJ9 113 aa8.9□□□□□ -0.98
H3F3B-213ENST00000593254 PARLQ9H300 379 aa8.9□□□□□ -0.98
H3F3B-213ENST00000593254 A0A087WTM6 91 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 TRBV6-1A0A0K0K1D8 114 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 A8MWV9 139 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 B4DEV8 164 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 EREGO14944 169 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 UBE2G1P62253 170 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 C10orf91Q5T1B1 145 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 XP32Q5T750 250 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 FRZBQ92765 325 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 SMDT1Q9H4I9 107 aa8.89□□□□□ -0.99
H3F3B-213ENST00000593254 HMCN2Q8NDA2 5059 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 TRAV8-6A0A0B4J262 113 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 H3BVH4 76 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 SH2D1AO60880 128 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 LTAP01374 205 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 FAM162BQ5T6X4 162 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 LELP1Q5T871 98 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 CST9LP1Q5W188 147 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 UFSP1Q6NVU6 142 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 CDPF1Q6NVV7 123 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 Q6ZSN1 163 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 MBD3L1Q8WWY6 194 aa8.88□□□□□ -0.99
H3F3B-213ENST00000593254 CARHSP1Q9Y2V2 147 aaKnown RBP8.88□□□□□ -0.99
H3F3B-213ENST00000593254 TMEM218A2RU14 115 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 M0R036 132 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 PAGE4O60829 102 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 ARMS2P0C7Q2 107 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 ZNF674Q2M3X9 581 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 OR10J3Q5JRS4 329 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 ATP6V0E2Q8NHE4 81 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 GTSF1LQ9H1H1 148 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 JPT2Q9H910 190 aa8.87□□□□□ -0.99
H3F3B-213ENST00000593254 IBA57-AS1B1ANH7 110 aa8.86□□□□□ -0.99
H3F3B-213ENST00000593254 FUSP35637 526 aaKnown RBP eCLIP8.86□□□□□ -0.997e-8■■■■□ 21.4
H3F3B-213ENST00000593254 AKR1C3P42330 323 aa8.86□□□□□ -0.99
H3F3B-213ENST00000593254 FAM213BQ8TBF2 198 aa8.86□□□□□ -0.99
H3F3B-213ENST00000593254 SFT2D1Q8WV19 159 aa8.86□□□□□ -0.99
H3F3B-213ENST00000593254 SEC11CQ9BY50 192 aa8.86□□□□□ -0.99
H3F3B-213ENST00000593254 SAMD10Q9BYL1 202 aa8.86□□□□□ -0.99
H3F3B-213ENST00000593254 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
H3F3B-213ENST00000593254 GRIFINA4D1Z8 144 aa8.85□□□□□ -0.99
H3F3B-213ENST00000593254 RHODO00212 210 aa8.85□□□□□ -0.99
H3F3B-213ENST00000593254 SVBPQ8N300 66 aa8.85□□□□□ -0.99
H3F3B-213ENST00000593254 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
H3F3B-213ENST00000593254 Q9UF83 564 aa8.85□□□□□ -0.99
H3F3B-213ENST00000593254 A0A1B0GV50 99 aa8.84□□□□□ -0.99
H3F3B-213ENST00000593254 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
H3F3B-213ENST00000593254 GAGE1Q13065 139 aa8.84□□□□□ -0.99
H3F3B-213ENST00000593254 GAGE4Q13068 117 aa8.84□□□□□ -0.99
H3F3B-213ENST00000593254 GAGE5Q13069 117 aa8.84□□□□□ -0.99
H3F3B-213ENST00000593254 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
H3F3B-213ENST00000593254 C14orf178Q8N769 122 aaPredicted RBP8.84□□□□□ -0.99
H3F3B-213ENST00000593254 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
H3F3B-213ENST00000593254 TMSB15BA0A087X1C1 80 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 TRAV1-1A0A0B4J248 108 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 SCO2A0A1W2PP80 73 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 IGHV3-30P01768 117 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 IGHV3-33P01772 117 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 S100A9P06702 114 aaKnown RBP8.83□□□□□ -1
H3F3B-213ENST00000593254 IGHV3-30-3P0DP02 117 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 IGHV3-30-5P0DP03 117 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 KRTAP10-1P60331 282 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 SFRP2Q96HF1 295 aa8.83□□□□□ -1
H3F3B-213ENST00000593254 LRP1Q07954 4544 aaKnown RBP8.82□□□□□ -1
H3F3B-213ENST00000593254 LRCOL1A6NCL2 159 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 PSCAO43653 123 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 NDUFS6O75380 124 aaKnown RBP8.82□□□□□ -1
H3F3B-213ENST00000593254 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
H3F3B-213ENST00000593254 H2AFB1P0C5Y9 115 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 LAGE3Q14657 143 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 PEA15Q15121 130 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 FAM74A4Q5TZK3 123 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 MLST8Q9BVC4 326 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 Q9HAA7 133 aa8.82□□□□□ -1
H3F3B-213ENST00000593254 A0A087WWL8 130 aa8.81□□□□□ -1
H3F3B-213ENST00000593254 M0R381 172 aa8.81□□□□□ -1
H3F3B-213ENST00000593254 SNAPINO95295 136 aa8.81□□□□□ -1
H3F3B-213ENST00000593254 APOC3P02656 99 aa8.81□□□□□ -1
H3F3B-213ENST00000593254 CXCL1P09341 107 aa8.81□□□□□ -1
H3F3B-213ENST00000593254 ZFP82Q8N141 532 aa8.81□□□□□ -1
H3F3B-213ENST00000593254 Q8N3U1 123 aa8.81□□□□□ -1
H3F3B-213ENST00000593254 A0A087WWC5 75 aa8.8□□□□□ -1
H3F3B-213ENST00000593254 F8W036 122 aa8.8□□□□□ -1
H3F3B-213ENST00000593254 ADCYAP1P18509 176 aa8.8□□□□□ -1
H3F3B-213ENST00000593254 BAGE2Q86Y30 109 aa8.8□□□□□ -1
H3F3B-213ENST00000593254 TRBV10-1A0A0K0K1A3 114 aa8.79□□□□□ -1
H3F3B-213ENST00000593254 FAM229AH3BQW9 127 aa8.79□□□□□ -1
H3F3B-213ENST00000593254 RPL19P84098 196 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms