RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SACSQ9NZJ4 4579 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 GEMIN2O14893 280 aaKnown RBP3.06□□□□□ -1.92
SMAD4-216ENST00000593223 RER1O15258 196 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 PMP2P02689 132 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 SLC25A5P05141 298 aaKnown RBP3.06□□□□□ -1.92
SMAD4-216ENST00000593223 CD2P06729 351 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 CTSDP07339 412 aaPredicted RBP3.06□□□□□ -1.92
SMAD4-216ENST00000593223 KLRD1Q13241 179 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 FAM104BQ5XKR9 115 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 EIF5AL1Q6IS14 154 aaKnown RBP3.06□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF101Q8IZC7 436 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 TMEM256Q8N2U0 113 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 LINC00526Q96FQ7 95 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 AQP10Q96PS8 301 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 OSTCQ9NRP0 149 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 FKBP11Q9NYL4 201 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 COMMD3Q9UBI1 195 aa3.06□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF443Q9Y2A4 671 aaPredicted RBP3.06□□□□□ -1.92
SMAD4-216ENST00000593223 ABCA13Q86UQ4 5058 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 TRBV20-1A0A075B6N2 111 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 IGKV1-9A0A0C4DH69 117 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 A0A1W2PRS3 328 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 TMEM262E9PQX1 116 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 G3V3Q6 166 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 APOC4-APOC2K7ER74 178 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 YPEL1O60688 119 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 APOC2P02655 101 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 APCSP02743 223 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 IGHV3-30-3P0DP02 117 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 MRPL51Q4U2R6 128 aaKnown RBP3.05□□□□□ -1.92
SMAD4-216ENST00000593223 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 LINC00299Q6ZSB3 139 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 AMN1Q8IY45 258 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 ZFAND2AQ8N6M9 145 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 OR4X2Q8NGF9 303 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 HIST1H2BLQ99880 126 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 TSSK6Q9BXA6 273 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 NPCDR1Q9BY65 106 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 AGPAT4-IT1Q9H0P7 198 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 PRO1933Q9H354 126 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 C16orf95Q9H693 158 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 UNC13CQ8NB66 2214 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
SMAD4-216ENST00000593223 C3orf85A0A1B0GTC6 90 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 RPL36A-HNRNPH2H7BZ11 118 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 LEPROTO15243 131 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 SYNGR2O43760 224 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 HBDP02042 147 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 MT-ND6P03923 174 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 OR5AC1P0C628 307 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 TRGC1P0CF51 173 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 RNASE4P34096 147 aaKnown RBP3.04□□□□□ -1.92
SMAD4-216ENST00000593223 FXYD7P58549 80 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 TSPEAR-AS2P59090 65 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF846Q147U1 533 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 Q6AWC8 147 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 MIR17HGQ75NE6 70 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 BPIFA4PQ86YQ2 179 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 HIST3H2BBQ8N257 126 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 WFDC5Q8TCV5 224 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 VAMP8Q9BV40 100 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 BET1LQ9NYM9 111 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 PHLDA3Q9Y5J5 127 aa3.04□□□□□ -1.92
SMAD4-216ENST00000593223 NCOA6Q14686 2063 aaPredicted RBP3.04□□□□□ -1.92
SMAD4-216ENST00000593223 CITO14578 2027 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.03□□□□□ -1.92
SMAD4-216ENST00000593223 A0A1B0GVX0 72 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 H3BT86 120 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 IGLV3-25P01717 112 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 IGLC1P0CG04 106 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 GZMBP10144 247 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 CRYGAP11844 174 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 CMC4P56277 68 aaPredicted RBP3.03□□□□□ -1.92
SMAD4-216ENST00000593223 C9orf153Q5TBE3 101 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 Q6ZS92 163 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 C7orf65Q6ZTY9 151 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 SPATA12Q7Z6I5 190 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 OR5AK2Q8NH90 309 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 PSMF1Q92530 271 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 DIRC1Q969H9 104 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF714Q96N38 554 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 PKMYT1Q99640 499 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 SLC35B3Q9H1N7 401 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 EPDR1Q9UM22 224 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 LINC00588Q9Y4M8 146 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 DNAJC15Q9Y5T4 150 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 SERP1Q9Y6X1 66 aa3.03□□□□□ -1.92
SMAD4-216ENST00000593223 HERC1Q15751 4861 aa3.03□□□□□ -1.93
SMAD4-216ENST00000593223 USF3Q68DE3 2245 aa3.03□□□□□ -1.93
SMAD4-216ENST00000593223 COL7A1Q02388 2944 aa3.03□□□□□ -1.93
SMAD4-216ENST00000593223 SCN2AQ99250 2005 aa3.02□□□□□ -1.93
SMAD4-216ENST00000593223 SPTY2D1-AS1A0A0U1RR47 76 aa3.02□□□□□ -1.93
SMAD4-216ENST00000593223 TRACP01848 142 aa3.02□□□□□ -1.93
SMAD4-216ENST00000593223 FOXA1P55317 472 aa3.02□□□□□ -1.93
SMAD4-216ENST00000593223 SNRPD3P62318 126 aaKnown RBP3.02□□□□□ -1.93
SMAD4-216ENST00000593223 DCDP81605 110 aaKnown RBP3.02□□□□□ -1.93
SMAD4-216ENST00000593223 MRPS36P82909 103 aaKnown RBP3.02□□□□□ -1.93
SMAD4-216ENST00000593223 EBI3Q14213 229 aa3.02□□□□□ -1.93
SMAD4-216ENST00000593223 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms