RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 FAM162BQ5T6X4 162 aa11.93□□□□□ -0.5
CIRBP-243ENST00000593128 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
CIRBP-243ENST00000593128 PHLDA3Q9Y5J5 127 aa11.93□□□□□ -0.5
CIRBP-243ENST00000593128 TRAV8-3A0A0A6YYJ7 113 aa11.92□□□□□ -0.5
CIRBP-243ENST00000593128 TPT1P13693 172 aaKnown RBP11.92□□□□□ -0.5
CIRBP-243ENST00000593128 FMC1Q96HJ9 113 aa11.92□□□□□ -0.5
CIRBP-243ENST00000593128 FAM30AQ9NZY2 134 aa11.92□□□□□ -0.5
CIRBP-243ENST00000593128 A0A087WWC5 75 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 RHODO00212 210 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 LINC00694P0DN24 101 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 PIK3CD-AS1Q5SR53 167 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 UFSP1Q6NVU6 142 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 TCTE3Q8IZS6 198 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 ZFP30Q9Y2G7 519 aa11.91□□□□□ -0.5
CIRBP-243ENST00000593128 A0A1B0GV50 99 aa11.9□□□□□ -0.5
CIRBP-243ENST00000593128 G3V3Q6 166 aa11.9□□□□□ -0.5
CIRBP-243ENST00000593128 SMLR1H3BR10 107 aa11.9□□□□□ -0.5
CIRBP-243ENST00000593128 AKR1C3P42330 323 aa11.9□□□□□ -0.5
CIRBP-243ENST00000593128 STOML3Q8TAV4 291 aa11.9□□□□□ -0.5
CIRBP-243ENST00000593128 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
CIRBP-243ENST00000593128 PFDN1O60925 122 aa11.89□□□□□ -0.51
CIRBP-243ENST00000593128 IGKV2D-24A0A075B6R9 120 aa11.88□□□□□ -0.51
CIRBP-243ENST00000593128 FHITP49789 147 aa11.88□□□□□ -0.51
CIRBP-243ENST00000593128 KCNIP4Q6PIL6 250 aa11.88□□□□□ -0.51
CIRBP-243ENST00000593128 SFRP2Q96HF1 295 aa11.88□□□□□ -0.51
CIRBP-243ENST00000593128 DNAJC30Q96LL9 226 aa11.88□□□□□ -0.51
CIRBP-243ENST00000593128 KLK12Q9UKR0 248 aa11.88□□□□□ -0.51
CIRBP-243ENST00000593128 PAGE4O60829 102 aa11.87□□□□□ -0.51
CIRBP-243ENST00000593128 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
CIRBP-243ENST00000593128 DNLZQ5SXM8 178 aa11.87□□□□□ -0.51
CIRBP-243ENST00000593128 ZFP82Q8N141 532 aa11.87□□□□□ -0.51
CIRBP-243ENST00000593128 RMI2Q96E14 147 aa11.87□□□□□ -0.51
CIRBP-243ENST00000593128 CYTL1Q9NRR1 136 aa11.87□□□□□ -0.51
CIRBP-243ENST00000593128 A0A087WX48 190 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 LTAP01374 205 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 ZNF674Q2M3X9 581 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 NIT1Q86X76 327 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 FAM213BQ8TBF2 198 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 DNAH8Q96JB1 4490 aa11.86□□□□□ -0.51
CIRBP-243ENST00000593128 RBFOX3A6NFN3 312 aa11.85□□□□□ -0.51
CIRBP-243ENST00000593128 SSTP61278 116 aa11.85□□□□□ -0.51
CIRBP-243ENST00000593128 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
CIRBP-243ENST00000593128 SFT2D1Q8WV19 159 aa11.85□□□□□ -0.51
CIRBP-243ENST00000593128 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
CIRBP-243ENST00000593128 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
CIRBP-243ENST00000593128 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
CIRBP-243ENST00000593128 C1QBP02746 253 aa11.84□□□□□ -0.51
CIRBP-243ENST00000593128 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
CIRBP-243ENST00000593128 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
CIRBP-243ENST00000593128 ZNF56Q15929 161 aa11.84□□□□□ -0.51
CIRBP-243ENST00000593128 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
CIRBP-243ENST00000593128 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
CIRBP-243ENST00000593128 MYCBP2O75592 4640 aa11.83□□□□□ -0.52
CIRBP-243ENST00000593128 MUC21A0A0G2JKD1 596 aa11.83□□□□□ -0.52
CIRBP-243ENST00000593128 TRBV6-1A0A0K0K1D8 114 aa11.83□□□□□ -0.52
CIRBP-243ENST00000593128 MUC21A0A140T8X8 626 aa11.83□□□□□ -0.52
CIRBP-243ENST00000593128 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
CIRBP-243ENST00000593128 SCO2A0A1W2PP80 73 aa11.82□□□□□ -0.52
CIRBP-243ENST00000593128 PRR27Q6MZM9 219 aa11.82□□□□□ -0.52
CIRBP-243ENST00000593128 LINC00528Q8N1L1 170 aa11.82□□□□□ -0.52
CIRBP-243ENST00000593128 DMBT1Q9UGM3 2413 aaPredicted RBP11.81□□□□□ -0.52
CIRBP-243ENST00000593128 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
CIRBP-243ENST00000593128 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
CIRBP-243ENST00000593128 HMSDA8MTL9 139 aa11.81□□□□□ -0.52
CIRBP-243ENST00000593128 J3QL48 77 aa11.81□□□□□ -0.52
CIRBP-243ENST00000593128 ELOBQ15370 118 aa11.81□□□□□ -0.52
CIRBP-243ENST00000593128 Q8N976 141 aa11.81□□□□□ -0.52
CIRBP-243ENST00000593128 OR10AG1Q8NH19 301 aa11.81□□□□□ -0.52
CIRBP-243ENST00000593128 FLG2Q5D862 2391 aaPredicted RBP11.81□□□□□ -0.52
CIRBP-243ENST00000593128 F5H697 171 aa11.8□□□□□ -0.52
CIRBP-243ENST00000593128 PLA2G1BP04054 148 aaKnown RBP11.8□□□□□ -0.52
CIRBP-243ENST00000593128 UBE2D3P61077 147 aa11.8□□□□□ -0.52
CIRBP-243ENST00000593128 UBE2D2P62837 147 aa11.8□□□□□ -0.52
CIRBP-243ENST00000593128 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
CIRBP-243ENST00000593128 BAGE2Q86Y30 109 aa11.8□□□□□ -0.52
CIRBP-243ENST00000593128 ZNF471Q9BX82 626 aaPredicted RBP11.8□□□□□ -0.52
CIRBP-243ENST00000593128 KCNRGQ8N5I3 272 aa11.79□□□□□ -0.52
CIRBP-243ENST00000593128 C15orf54Q8N8G6 183 aa11.79□□□□□ -0.52
CIRBP-243ENST00000593128 KANTRA0A1W2PQU2 76 aa11.78□□□□□ -0.52
CIRBP-243ENST00000593128 CRPP02741 224 aa11.78□□□□□ -0.52
CIRBP-243ENST00000593128 S100A9P06702 114 aaKnown RBP11.78□□□□□ -0.52
CIRBP-243ENST00000593128 RAB4BP61018 213 aa11.78□□□□□ -0.52
CIRBP-243ENST00000593128 CHCHD5Q9BSY4 110 aa11.78□□□□□ -0.52
CIRBP-243ENST00000593128 UMAD1C9J7I0 102 aa11.77□□□□□ -0.53
CIRBP-243ENST00000593128 ANGP03950 147 aaKnown RBP11.77□□□□□ -0.53
CIRBP-243ENST00000593128 Q6ZSA8 131 aa11.77□□□□□ -0.53
CIRBP-243ENST00000593128 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.53
CIRBP-243ENST00000593128 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
CIRBP-243ENST00000593128 MBD3L1Q8WWY6 194 aa11.77□□□□□ -0.53
CIRBP-243ENST00000593128 CHCHD7Q9BUK0 85 aa11.77□□□□□ -0.53
CIRBP-243ENST00000593128 C1orf43Q9BWL3 253 aa11.77□□□□□ -0.53
CIRBP-243ENST00000593128 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
CIRBP-243ENST00000593128 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
CIRBP-243ENST00000593128 SMIM17P0DL12 118 aa11.76□□□□□ -0.53
CIRBP-243ENST00000593128 NKX2-5P52952 324 aaPredicted RBP11.76□□□□□ -0.53
CIRBP-243ENST00000593128 Q0VG73 95 aa11.76□□□□□ -0.53
CIRBP-243ENST00000593128 ZNF345Q14585 488 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms