RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 MCRIP2Q9BUT9 160 aaKnown RBP13.84□□□□□ -0.19
HDAC5-212ENST00000593013 HLA-DRB4X5D2U9 266 aa13.84□□□□□ -0.19
HDAC5-212ENST00000593013 IGHV1OR15-1A0A075B7D0 117 aa13.83□□□□□ -0.2
HDAC5-212ENST00000593013 PPP1R17O96001 155 aa13.83□□□□□ -0.2
HDAC5-212ENST00000593013 LINC00315P59091 139 aa13.83□□□□□ -0.2
HDAC5-212ENST00000593013 LAGE3Q14657 143 aa13.83□□□□□ -0.2
HDAC5-212ENST00000593013 SPINK13Q1W4C9 94 aa13.83□□□□□ -0.2
HDAC5-212ENST00000593013 A0A1B0GV90 55 aa13.82□□□□□ -0.2
HDAC5-212ENST00000593013 K7EMI3 77 aa13.82□□□□□ -0.2
HDAC5-212ENST00000593013 CITED2Q99967 270 aaPredicted RBP13.82□□□□□ -0.2
HDAC5-212ENST00000593013 GOLT1BQ9Y3E0 138 aa13.82□□□□□ -0.2
HDAC5-212ENST00000593013 TRAV12-2A0A075B6T6 113 aa13.81□□□□□ -0.2
HDAC5-212ENST00000593013 IGKV3-20P01619 116 aa13.81□□□□□ -0.2
HDAC5-212ENST00000593013 SUMO2P61956 95 aaKnown RBP13.81□□□□□ -0.2
HDAC5-212ENST00000593013 DEFB114Q30KQ6 69 aa13.81□□□□□ -0.2
HDAC5-212ENST00000593013 RAX2Q96IS3 184 aa13.81□□□□□ -0.2
HDAC5-212ENST00000593013 PMCHL2Q9BQD1 86 aa13.81□□□□□ -0.2
HDAC5-212ENST00000593013 DEFB131AP59861 70 aa13.81□□□□□ -0.2
HDAC5-212ENST00000593013 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
HDAC5-212ENST00000593013 H3BMM0 161 aa13.8□□□□□ -0.2
HDAC5-212ENST00000593013 NUTF2P61970 127 aaKnown RBP13.8□□□□□ -0.2
HDAC5-212ENST00000593013 RPL32P62910 135 aaKnown RBP13.8□□□□□ -0.2
HDAC5-212ENST00000593013 TSSC4Q9Y5U2 329 aaPredicted RBP13.8□□□□□ -0.2
HDAC5-212ENST00000593013 TRAV25A0A0B4J276 109 aa13.79□□□□□ -0.2
HDAC5-212ENST00000593013 ADARB2-AS1A8MUL3 147 aa13.79□□□□□ -0.2
HDAC5-212ENST00000593013 MGPP08493 103 aa13.79□□□□□ -0.2
HDAC5-212ENST00000593013 KRTAP21-3Q3LHN1 58 aa13.79□□□□□ -0.2
HDAC5-212ENST00000593013 SPAG8Q99932 426 aaPredicted RBP13.79□□□□□ -0.2
HDAC5-212ENST00000593013 KNCNA6PVL3 124 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 ATP5LO75964 103 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 Q8N1Y9 231 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 MDFIQ99750 246 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 MAP6D1Q9H9H5 199 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 TRGV11A0A075B6L2 103 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 SMIM17P0DL12 118 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 ORMDL2Q53FV1 153 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 SLC25A34Q6PIV7 304 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 SYT8Q8NBV8 401 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
HDAC5-212ENST00000593013 CITED1Q99966 193 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 MDFICQ9P1T7 246 aa13.78□□□□□ -0.2
HDAC5-212ENST00000593013 WNK1Q9H4A3 2382 aa13.77□□□□□ -0.2
HDAC5-212ENST00000593013 RBMY1BA6NDE4 496 aaKnown RBP13.77□□□□□ -0.21
HDAC5-212ENST00000593013 RBMY1EA6NEQ0 496 aaKnown RBP13.77□□□□□ -0.21
HDAC5-212ENST00000593013 TCAPO15273 167 aa13.77□□□□□ -0.21
HDAC5-212ENST00000593013 RBMY1DP0C7P1 496 aaKnown RBP13.77□□□□□ -0.21
HDAC5-212ENST00000593013 ZMAT4Q9H898 229 aa13.77□□□□□ -0.21
HDAC5-212ENST00000593013 SORL1Q92673 2214 aa13.77□□□□□ -0.21
HDAC5-212ENST00000593013 VWFP04275 2813 aa13.77□□□□□ -0.21
HDAC5-212ENST00000593013 CCL24O00175 119 aa13.76□□□□□ -0.21
HDAC5-212ENST00000593013 ODF1Q14990 250 aa13.76□□□□□ -0.21
HDAC5-212ENST00000593013 CD300EQ496F6 205 aaPredicted RBP13.76□□□□□ -0.21
HDAC5-212ENST00000593013 C18orf15Q96N68 181 aa13.76□□□□□ -0.21
HDAC5-212ENST00000593013 CLUHP3Q96NS8 147 aa13.76□□□□□ -0.21
HDAC5-212ENST00000593013 ZNF256Q9Y2P7 627 aaPredicted RBP13.76□□□□□ -0.21
HDAC5-212ENST00000593013 RBMY1A1P0DJD3 496 aaKnown RBP13.76□□□□□ -0.21
HDAC5-212ENST00000593013 RBMY1CP0DJD4 496 aa13.76□□□□□ -0.21
HDAC5-212ENST00000593013 COX8AP10176 69 aa13.76□□□□□ -0.21
HDAC5-212ENST00000593013 RBMY1FQ15415 496 aaKnown RBP13.76□□□□□ -0.21
HDAC5-212ENST00000593013 A0A1W2PRX2 142 aa13.75□□□□□ -0.21
HDAC5-212ENST00000593013 NDUFA11Q86Y39 141 aa13.75□□□□□ -0.21
HDAC5-212ENST00000593013 JPT2Q9H910 190 aa13.75□□□□□ -0.21
HDAC5-212ENST00000593013 TRRAPQ9Y4A5 3859 aa13.75□□□□□ -0.21
HDAC5-212ENST00000593013 SUMO4Q6EEV6 95 aa13.74□□□□□ -0.21
HDAC5-212ENST00000593013 NUDT3O95989 172 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 ANKRD39Q53RE8 183 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 C12orf54Q6X4T0 127 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 LINC00467Q9BRT7 94 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 DKK2Q9UBU2 259 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 TRBV6-5A0A0K0K1A5 114 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 COL5A1-AS1Q5SY13 56 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 TOMM6Q96B49 74 aa13.73□□□□□ -0.21
HDAC5-212ENST00000593013 CRYGDP07320 174 aa13.72□□□□□ -0.21
HDAC5-212ENST00000593013 POLR2KP53803 58 aaKnown RBP13.72□□□□□ -0.21
HDAC5-212ENST00000593013 A0A087WWL8 130 aa13.71□□□□□ -0.21
HDAC5-212ENST00000593013 PRSS1P07477 247 aa13.71□□□□□ -0.21
HDAC5-212ENST00000593013 FGF6P10767 208 aa13.71□□□□□ -0.21
HDAC5-212ENST00000593013 ZNF124Q15973 351 aa13.71□□□□□ -0.21
HDAC5-212ENST00000593013 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
HDAC5-212ENST00000593013 CSTL1Q9H114 145 aa13.71□□□□□ -0.21
HDAC5-212ENST00000593013 ANK2Q01484 3957 aa13.71□□□□□ -0.22
HDAC5-212ENST00000593013 CBY3A6NI87 242 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 BATFQ16520 125 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 PTH2Q96A98 100 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 TP73-AS1Q9UF72 201 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 TRAV12-1A0A0B4J245 112 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 PIK3CD-AS1Q5SR53 167 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 C3orf56Q8N813 242 aa13.7□□□□□ -0.22
HDAC5-212ENST00000593013 DLEU1O43261 78 aa13.69□□□□□ -0.22
HDAC5-212ENST00000593013 STPG4Q8N801 248 aa13.69□□□□□ -0.22
HDAC5-212ENST00000593013 EDA2RQ9HAV5 297 aa13.69□□□□□ -0.22
HDAC5-212ENST00000593013 A0A087WX48 190 aa13.68□□□□□ -0.22
HDAC5-212ENST00000593013 LINC01549A6NIU2 74 aa13.68□□□□□ -0.22
HDAC5-212ENST00000593013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.68□□□□□ -0.22
HDAC5-212ENST00000593013 DPM2O94777 84 aa13.68□□□□□ -0.22
HDAC5-212ENST00000593013 IGKCP01834 107 aa13.68□□□□□ -0.22
HDAC5-212ENST00000593013 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
HDAC5-212ENST00000593013 HHLA3Q9XRX5 114 aa13.68□□□□□ -0.22
HDAC5-212ENST00000593013 M0QY20 66 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms