RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 IGLC7A0M8Q6 106 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 MCRIP1C9JLW8 97 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 C11orf94C9JXX5 98 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 HIST1H2BKO60814 126 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 NDUFB6O95139 128 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 RBP4P02753 201 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 HIST1H2BJP06899 126 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 CEMP1Q6PRD7 247 aaPredicted RBP4.05□□□□□ -1.76
VMP1-215ENST00000592619 HMGN2P46Q86SG4 172 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 ITLN2Q8WWU7 325 aaPredicted RBP4.05□□□□□ -1.76
VMP1-215ENST00000592619 PRELID3AQ96N28 172 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 SHANK2-AS3Q9BTD1 123 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 SLC35B3Q9H1N7 401 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 TXNL4BQ9NX01 149 aaKnown RBP4.05□□□□□ -1.76
VMP1-215ENST00000592619 IL36BQ9NZH7 164 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 LINC00588Q9Y4M8 146 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 ADGRG4Q8IZF6 3080 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 FLNCQ14315 2725 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 HELZ2Q9BYK8 2649 aaKnown RBP4.04□□□□□ -1.76
VMP1-215ENST00000592619 MYO18BQ8IUG5 2567 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 IGLV1-50A0A075B6I6 118 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 IGKV1-9A0A0C4DH69 117 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 OOSP1A8MZH6 123 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 NMBP08949 121 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 TLX1NBP0CAT3 122 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 TRGC1P0CF51 173 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 PDPNQ86YL7 162 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 ZNF101Q8IZC7 436 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 RPRMLQ8N4K4 120 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 RNASE6Q93091 150 aaKnown RBP4.04□□□□□ -1.76
VMP1-215ENST00000592619 SLC39A9Q9NUM3 307 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 OR5V1Q9UGF6 321 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 TPRKBQ9Y3C4 175 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 ZNF407Q9C0G0 2248 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 FREM3P0C091 2139 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 ESPL1Q14674 2120 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 ZGRF1Q86YA3 2104 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 HEATR5AQ86XA9 2040 aa4.04□□□□□ -1.76
VMP1-215ENST00000592619 NBPF19A0A087WUL8 3843 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 A0A1B0GWA3 101 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 M0R129 80 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 PITX3O75364 302 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 IGHV3-11P01762 117 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 HBDP02042 147 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 GYPAP02724 150 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 FABP4P15090 132 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 HLA-DMBP28068 263 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 RNASE4P34096 147 aaKnown RBP4.03□□□□□ -1.76
VMP1-215ENST00000592619 ASIPP42127 132 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 CSN1S1P47710 185 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 KRTAP10-3P60369 221 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 SNRPD3P62318 126 aaKnown RBP4.03□□□□□ -1.76
VMP1-215ENST00000592619 RPL30P62888 115 aaKnown RBP4.03□□□□□ -1.76
VMP1-215ENST00000592619 MRPS36P82909 103 aaKnown RBP4.03□□□□□ -1.76
VMP1-215ENST00000592619 DEFB107AQ8IZN7 70 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 LSM2Q9Y333 95 aaKnown RBP4.03□□□□□ -1.76
VMP1-215ENST00000592619 POLEQ07864 2286 aa4.03□□□□□ -1.76
VMP1-215ENST00000592619 DNAJC13O75165 2243 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 HIVEP3Q5T1R4 2406 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 IGKV1-12A0A0C4DH73 117 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 MUC21A0A0G2JKD1 596 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 FAM24AA6NFZ4 105 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 CPSF4LA6NMK7 179 aaKnown RBP4.02□□□□□ -1.77
VMP1-215ENST00000592619 ZNF324O75467 553 aaPredicted RBP4.02□□□□□ -1.77
VMP1-215ENST00000592619 IGKV1D-12P01611 117 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 GYPBP06028 91 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 IGHV1-8P0DP01 117 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 ZNF32P17041 273 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 TFF3Q07654 80 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 HMGN3Q15651 99 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 SPRNQ5BIV9 151 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 Q8N2B8 174 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 OR10G2Q8NGC3 310 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 DIRC1Q969H9 104 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 CAMK2N2Q96S95 79 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 DOPEY1Q5JWR5 2465 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 SVILO95425 2214 aa4.02□□□□□ -1.77
VMP1-215ENST00000592619 ASH1LQ9NR48 2969 aaKnown RBP4.01□□□□□ -1.77
VMP1-215ENST00000592619 USP9XQ93008 2570 aaPredicted RBP4.01□□□□□ -1.77
VMP1-215ENST00000592619 IGKV1D-42A0A075B6H8 117 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 IGHV3-72A0A0B4J1Y9 119 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 IGKV1-6A0A0C4DH72 117 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 C7orf66A4D0T2 115 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 SSSCA1O60232 199 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 SFT2D2O95562 160 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 CYB5AP00167 134 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 IGKV1-39P01597 117 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 IGKV1D-39P04432 117 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 SLC25A4P12235 298 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 LSM3P62310 102 aaKnown RBP4.01□□□□□ -1.77
VMP1-215ENST00000592619 MPV17L2Q567V2 206 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 ORMDL3Q8N138 153 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 CNEP1R1Q8N9A8 125 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 LSM10Q969L4 123 aaKnown RBP4.01□□□□□ -1.77
VMP1-215ENST00000592619 B9D2Q9BPU9 175 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 WFDC6Q9BQY6 131 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 RABAC1Q9UI14 185 aa4.01□□□□□ -1.77
VMP1-215ENST00000592619 MED12LQ86YW9 2145 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms