RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 EPM2AB3EWF7 344 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 B4DEV8 164 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 M0R2P5 195 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 GYPEP15421 78 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 EVI2AP22794 236 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 S100A4P26447 101 aaKnown RBP7.03□□□□□ -1.28
VPS4B-207ENST00000591519 RPL35P42766 123 aaKnown RBP7.03□□□□□ -1.28
VPS4B-207ENST00000591519 TIRAPP58753 221 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 FAM162BQ5T6X4 162 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 PRR27Q6MZM9 219 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 BAGE2Q86Y30 109 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 PCNPQ8WW12 178 aaKnown RBP7.03□□□□□ -1.28
VPS4B-207ENST00000591519 TXNDC17Q9BRA2 123 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 MSRB1Q9NZV6 116 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 TRBV6-1A0A0K0K1D8 114 aa7.02□□□□□ -1.29
VPS4B-207ENST00000591519 RAB19A4D1S5 217 aa7.02□□□□□ -1.29
VPS4B-207ENST00000591519 S100A9P06702 114 aaKnown RBP7.02□□□□□ -1.29
VPS4B-207ENST00000591519 BCL2P10415 239 aa7.02□□□□□ -1.29
VPS4B-207ENST00000591519 BLOC1S1P78537 153 aa7.02□□□□□ -1.29
VPS4B-207ENST00000591519 MEF2BQ02080 365 aaPredicted RBP7.02□□□□□ -1.29
VPS4B-207ENST00000591519 WFDC10BQ8IUB3 73 aa7.02□□□□□ -1.29
VPS4B-207ENST00000591519 OR4C5Q8NGB2 326 aa7.02□□□□□ -1.29
VPS4B-207ENST00000591519 MED9Q9NWA0 146 aa7.02□□□□□ -1.29
VPS4B-207ENST00000591519 IGHV3-73A0A0B4J1V6 119 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 H3BVH4 76 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 CIDEAO60543 219 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 MGST1P10620 155 aaKnown RBP7.01□□□□□ -1.29
VPS4B-207ENST00000591519 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS4B-207ENST00000591519 ASIPP42127 132 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 KRTAP10-1P60331 282 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 RPL19P84098 196 aaKnown RBP7.01□□□□□ -1.29
VPS4B-207ENST00000591519 ZNF674Q2M3X9 581 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 CENPWQ5EE01 88 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 C10orf126Q8N4M7 172 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 VAX2Q9UIW0 290 aa7.01□□□□□ -1.29
VPS4B-207ENST00000591519 KRBOX1C9JBD0 128 aa7□□□□□ -1.29
VPS4B-207ENST00000591519 RNASE3P12724 160 aaKnown RBP7□□□□□ -1.29
VPS4B-207ENST00000591519 GATA1P15976 413 aaPredicted RBP7□□□□□ -1.29
VPS4B-207ENST00000591519 CEBPGP53567 150 aa7□□□□□ -1.29
VPS4B-207ENST00000591519 ZNF876PQ49A33 203 aa7□□□□□ -1.29
VPS4B-207ENST00000591519 ZNF506Q5JVG8 444 aa7□□□□□ -1.29
VPS4B-207ENST00000591519 C11orf52Q96A22 123 aa7□□□□□ -1.29
VPS4B-207ENST00000591519 C9orf85Q96MD7 179 aa7□□□□□ -1.29
VPS4B-207ENST00000591519 IGHV3-38A0A0C4DH36 116 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 LRCOL1A6NCL2 159 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 PDE6DO43924 150 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 CRYGDP07320 174 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 ARMS2P0C7Q2 107 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 GNG4P50150 75 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 TOR2AQ5JU69 321 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 COX8CQ7Z4L0 72 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 PTH2Q96A98 100 aa6.99□□□□□ -1.29
VPS4B-207ENST00000591519 MUC21A0A0G2JKD1 596 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 LOC100131303A0A0U1RQF7 123 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 MUC21A0A140T8X8 626 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 TRBV6-4A0A1B0GX49 114 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 RBFOX3A6NFN3 312 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 IBA57-AS1B1ANH7 110 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 INAFM2P0DMQ5 153 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 GCSHP23434 173 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 SSTP61278 116 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 LINC01556Q5JQF7 62 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 MLST8Q9BVC4 326 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 EIF5A2Q9GZV4 153 aaKnown RBP6.98□□□□□ -1.29
VPS4B-207ENST00000591519 JPT2Q9H910 190 aa6.98□□□□□ -1.29
VPS4B-207ENST00000591519 M0R381 172 aa6.97□□□□□ -1.29
VPS4B-207ENST00000591519 RS1O15537 224 aa6.97□□□□□ -1.29
VPS4B-207ENST00000591519 IGLV2-8P01709 118 aa6.97□□□□□ -1.29
VPS4B-207ENST00000591519 CFAP126Q5VTH2 177 aa6.97□□□□□ -1.29
VPS4B-207ENST00000591519 SLC25A29Q8N8R3 303 aa6.97□□□□□ -1.29
VPS4B-207ENST00000591519 DAZAP1Q96EP5 407 aaKnown RBP6.97□□□□□ -1.29
VPS4B-207ENST00000591519 IL36BQ9NZH7 164 aa6.97□□□□□ -1.29
VPS4B-207ENST00000591519 PHLDA3Q9Y5J5 127 aa6.97□□□□□ -1.29
VPS4B-207ENST00000591519 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 TRAV8-6A0A0B4J262 113 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 GZMBP10144 247 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 TAGLN2P37802 199 aaKnown RBP6.96□□□□□ -1.3
VPS4B-207ENST00000591519 Q5VSD8 79 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 TEX261Q6UWH6 196 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
VPS4B-207ENST00000591519 FRZBQ92765 325 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 PRADC1Q9BSG0 188 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 TPPP3Q9BW30 176 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 SAMD10Q9BYL1 202 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 PARLQ9H300 379 aa6.96□□□□□ -1.3
VPS4B-207ENST00000591519 FAT1Q14517 4588 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 A0A087WWL8 130 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 RHOHQ15669 191 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 PIK3CD-AS1Q5SR53 167 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 LELP1Q5T871 98 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 FAM74A4Q5TZK3 123 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 OR2D3Q8NGH3 330 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 LYPD6BQ8NI32 183 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 TMEM70Q9BUB7 260 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
VPS4B-207ENST00000591519 PSCAO43653 123 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 P01737 135 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 DNLZQ5SXM8 178 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms