RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RNASE7Q9H1E1 156 aaKnown RBP4.53□□□□□ -1.68
VPS4B-205ENST00000591383 RPP21Q9H633 154 aaKnown RBP4.53□□□□□ -1.68
VPS4B-205ENST00000591383 NAT8Q9UHE5 227 aa4.53□□□□□ -1.68
VPS4B-205ENST00000591383 LYSTQ99698 3801 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 MUC21A0A0G2JKD1 596 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 MUC21A0A140T8X8 626 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 hDV102S1A0JD36 115 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 XKRY2A2RUG3 117 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 IGLL5B9A064 214 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 C3orf84H3BNL1 204 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 M0R381 172 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 SPINK4O60575 86 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 NDUFS6O75380 124 aaKnown RBP4.52□□□□□ -1.69
VPS4B-205ENST00000591383 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
VPS4B-205ENST00000591383 ERVFC1-1P60608 527 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 RPS20P60866 119 aaKnown RBP4.52□□□□□ -1.69
VPS4B-205ENST00000591383 SSTP61278 116 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 ZNF876PQ49A33 203 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 FAM74A3Q4VXF1 159 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 CEMP1Q6PRD7 247 aaPredicted RBP4.52□□□□□ -1.69
VPS4B-205ENST00000591383 Q75L30 129 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 LINC01551Q86U37 167 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 KLK5Q9Y337 293 aaPredicted RBP4.52□□□□□ -1.69
VPS4B-205ENST00000591383 PHLDA3Q9Y5J5 127 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 MUC4Q99102 2169 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 DNAH1Q9P2D7 4330 aa4.52□□□□□ -1.69
VPS4B-205ENST00000591383 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
VPS4B-205ENST00000591383 NACAE9PAV3 2078 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 IGHV4-4A0A075B6R2 117 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 TRGV4A0A0C4DH28 118 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 A0A0J9YY99 117 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 C19orf71A6NCJ1 209 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 GATCO43716 136 aaKnown RBP4.51□□□□□ -1.69
VPS4B-205ENST00000591383 CXCL1P09341 107 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 ARMS2P0C7Q2 107 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 KRTAP10-2P60368 255 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 RPL23P62829 140 aaKnown RBP4.51□□□□□ -1.69
VPS4B-205ENST00000591383 PNRC1Q12796 327 aaPredicted RBP4.51□□□□□ -1.69
VPS4B-205ENST00000591383 FHL2Q14192 279 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 TMEM241Q24JQ0 296 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 LGALS9BQ3B8N2 356 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 CASC10Q5T4H9 136 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 FAM74A4Q5TZK3 123 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 SPANXN1Q5VSR9 72 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 ZFP82Q8N141 532 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 LINC00612Q8N6U2 182 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 C15orf54Q8N8G6 183 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 FER1L6-AS1Q8NA97 138 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 OR4C5Q8NGB2 326 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 OR10AG1Q8NH19 301 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 IL36BQ9NZH7 164 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 LY96Q9Y6Y9 160 aa4.51□□□□□ -1.69
VPS4B-205ENST00000591383 TRAV26-1A0A087WT03 109 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 IGHV3-73A0A0B4J1V6 119 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 TRAV4A0A0B4J268 109 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 F8W036 122 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 NUDT3O95989 172 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 CTRLP40313 264 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 UQCC3Q6UW78 93 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 ISOC2Q96AB3 205 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 SFRP2Q96HF1 295 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 AP1S3Q96PC3 154 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 NDUFAF3Q9BU61 184 aa4.5□□□□□ -1.69
VPS4B-205ENST00000591383 IGLV5-39A0A0G2JS06 123 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 LINC00862A6NCI5 91 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 SNAI2O43623 268 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 MGPP08493 103 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 IGLC6P0CF74 106 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 ADCYAP1P18509 176 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 AMTP48728 403 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 ZNF56Q15929 161 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 DNLZQ5SXM8 178 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 CFAP126Q5VTH2 177 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 FAM231DQ6ZW35 169 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 OR10G8Q8NGN5 311 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 RASL10AQ92737 203 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 BORCS7Q96B45 105 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 PGLYRP4Q96LB8 373 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 JPT2Q9H910 190 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 OSTCQ9NRP0 149 aa4.49□□□□□ -1.69
VPS4B-205ENST00000591383 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 A8MWL6 223 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 A8MWV9 139 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 RS1O15537 224 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 NXPH4O95158 308 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 OR5AL1P0C617 328 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 SMIM17P0DL12 118 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 CACNG7P62955 275 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 UBE2DNLQ8IWF7 75 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 C15orf53Q8NAA6 179 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 GTSF1Q8WW33 167 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 C18orf15Q96N68 181 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 SCRT2Q9NQ03 307 aa4.48□□□□□ -1.69
VPS4B-205ENST00000591383 A0A096LPF7 62 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms