RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 CRYGDP07320 174 aa12.89□□□□□ -0.35
CROCCP3-205ENST00000591316 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
CROCCP3-205ENST00000591316 WDR73Q6P4I2 378 aa12.89□□□□□ -0.35
CROCCP3-205ENST00000591316 TMEM88Q6PEY1 159 aa12.89□□□□□ -0.35
CROCCP3-205ENST00000591316 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
CROCCP3-205ENST00000591316 C7orf77A4D0Y5 90 aa12.88□□□□□ -0.35
CROCCP3-205ENST00000591316 SMIM17P0DL12 118 aa12.88□□□□□ -0.35
CROCCP3-205ENST00000591316 RPS10P5Q9NQ39 176 aa12.88□□□□□ -0.35
CROCCP3-205ENST00000591316 A0A1B0GUT8 65 aa12.87□□□□□ -0.35
CROCCP3-205ENST00000591316 EVI2AP22794 236 aa12.87□□□□□ -0.35
CROCCP3-205ENST00000591316 PAX4O43316 350 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 Q6ZSN1 163 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 SVBPQ8N300 66 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 AP1S3Q96PC3 154 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 F5H697 171 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 CIDEAO60543 219 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 TRGC1P0CF51 173 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 CRYBA4P53673 196 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 SLAQ13239 276 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 UFSP1Q6NVU6 142 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 CTDSP1Q9GZU7 261 aa12.86□□□□□ -0.35
CROCCP3-205ENST00000591316 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
CROCCP3-205ENST00000591316 SNAPINO95295 136 aa12.85□□□□□ -0.35
CROCCP3-205ENST00000591316 NUDT3O95989 172 aa12.85□□□□□ -0.35
CROCCP3-205ENST00000591316 RIGQ13278 110 aa12.85□□□□□ -0.35
CROCCP3-205ENST00000591316 VSIG2Q96IQ7 327 aa12.85□□□□□ -0.35
CROCCP3-205ENST00000591316 RHODO00212 210 aa12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 MGPP08493 103 aa12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 GATA1P15976 413 aaPredicted RBP12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 RHEBQ15382 184 aa12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 ZNF56Q15929 161 aa12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 MRPL54Q6P161 138 aaKnown RBP12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 SMIM15Q7Z3B0 74 aa12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 SLC25A29Q8N8R3 303 aa12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 CSMD3Q7Z407 3707 aa12.84□□□□□ -0.35
CROCCP3-205ENST00000591316 CAMPP49913 170 aa12.83□□□□□ -0.36
CROCCP3-205ENST00000591316 KRTAP3-3Q9BYR6 98 aa12.83□□□□□ -0.36
CROCCP3-205ENST00000591316 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
CROCCP3-205ENST00000591316 KIF25-AS1Q9Y6Z4 181 aa12.83□□□□□ -0.36
CROCCP3-205ENST00000591316 FAM210BQ96KR6 192 aa12.82□□□□□ -0.36
CROCCP3-205ENST00000591316 STARD9Q9P2P6 4700 aa12.82□□□□□ -0.36
CROCCP3-205ENST00000591316 LOC100131303A0A0U1RQF7 123 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 DPH3P1Q9H4G8 78 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 APLNQ9ULZ1 77 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 URGCP-MRPS24S4R325 110 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 A0A087WWC5 75 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 TRBV6-4A0A1B0GX49 114 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 GYPEP15421 78 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 LINC00315P59091 139 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 TMEM242Q9NWH2 141 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 Q9UF83 564 aa12.81□□□□□ -0.36
CROCCP3-205ENST00000591316 A0A096LPF7 62 aa12.8□□□□□ -0.36
CROCCP3-205ENST00000591316 P0DMU3 169 aa12.8□□□□□ -0.36
CROCCP3-205ENST00000591316 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
CROCCP3-205ENST00000591316 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
CROCCP3-205ENST00000591316 RAB4BP61018 213 aa12.8□□□□□ -0.36
CROCCP3-205ENST00000591316 KCNIP4Q6PIL6 250 aa12.8□□□□□ -0.36
CROCCP3-205ENST00000591316 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
CROCCP3-205ENST00000591316 K7EQD1 137 aa12.79□□□□□ -0.36
CROCCP3-205ENST00000591316 IMMP2LQ96T52 175 aa12.79□□□□□ -0.36
CROCCP3-205ENST00000591316 S100PP25815 95 aa12.78□□□□□ -0.36
CROCCP3-205ENST00000591316 RHOHQ15669 191 aa12.78□□□□□ -0.36
CROCCP3-205ENST00000591316 C15orf53Q8NAA6 179 aa12.78□□□□□ -0.36
CROCCP3-205ENST00000591316 H3BNG1 76 aa12.77□□□□□ -0.36
CROCCP3-205ENST00000591316 BTF3L4Q96K17 158 aa12.77□□□□□ -0.36
CROCCP3-205ENST00000591316 TMEM191AQ9H0A3 160 aa12.77□□□□□ -0.36
CROCCP3-205ENST00000591316 ICOSQ9Y6W8 199 aa12.77□□□□□ -0.36
CROCCP3-205ENST00000591316 DYNC2H1Q8NCM8 4307 aaKnown RBP12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 GAGE12JA6NER3 117 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 TCTAP57738 103 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 HBBP68871 147 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 GAGE1Q13065 139 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 GAGE4Q13068 117 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 GAGE5Q13069 117 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 MRPL23Q16540 153 aaKnown RBP12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 GAGE13Q4V321 117 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 SUMO4Q6EEV6 95 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 AMN1Q8IY45 258 aa12.77□□□□□ -0.37
CROCCP3-205ENST00000591316 PLECQ15149 4684 aaKnown RBP12.76□□□□□ -0.37
CROCCP3-205ENST00000591316 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
CROCCP3-205ENST00000591316 A0A1B0GW15 77 aa12.75□□□□□ -0.37
CROCCP3-205ENST00000591316 A0A1B0GXF2 115 aa12.75□□□□□ -0.37
CROCCP3-205ENST00000591316 SRIP30626 198 aa12.75□□□□□ -0.37
CROCCP3-205ENST00000591316 ATP5L2Q7Z4Y8 100 aa12.75□□□□□ -0.37
CROCCP3-205ENST00000591316 ZNRF2Q8NHG8 242 aa12.75□□□□□ -0.37
CROCCP3-205ENST00000591316 S100A8P05109 93 aa12.74□□□□□ -0.37
CROCCP3-205ENST00000591316 RAB4AP20338 218 aa12.74□□□□□ -0.37
CROCCP3-205ENST00000591316 M0QY20 66 aa12.73□□□□□ -0.37
CROCCP3-205ENST00000591316 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
CROCCP3-205ENST00000591316 NEGR1Q7Z3B1 354 aa12.73□□□□□ -0.37
CROCCP3-205ENST00000591316 GATD1Q8NB37 220 aa12.73□□□□□ -0.37
CROCCP3-205ENST00000591316 TRBV10-1A0A0K0K1A3 114 aa12.72□□□□□ -0.37
CROCCP3-205ENST00000591316 H7C1H1 209 aa12.72□□□□□ -0.37
CROCCP3-205ENST00000591316 ATP6V1G1O75348 118 aa12.72□□□□□ -0.37
CROCCP3-205ENST00000591316 RPL36AP83881 106 aaKnown RBP12.72□□□□□ -0.37
CROCCP3-205ENST00000591316 FAM104BQ5XKR9 115 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms