RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	SCP2D1	Q9UJQ7	156 aa		3.79	□□□□□ -1.8
DNMT1-222	ENST00000590619	TAS2R30	P59541	319 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	S100A10	P60903	97 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	VBP1	P61758	197 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	PKIA	P61925	76 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	NCS1	P62166	190 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	MT1H	P80294	61 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	TPRXL	Q17RH7	258 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	OR10G8	Q8NGN5	311 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	SGK494	Q96LW2	274 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	HYLS1	Q96M11	299 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	RETNLB	Q9BQ08	111 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	SLIRP	Q9GZT3	109 aa	Known RBP	3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	SSPO	A2VEC9	5147 aa		3.78	□□□□□ -1.8
DNMT1-222	ENST00000590619	IGKV3D-20	A0A0C4DH25	116 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	ANKRD20A5P	A0PJZ0	165 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	C7orf66	A4D0T2	115 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	RHOD	O00212	210 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	AMT	P48728	403 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	KRTAP10-6	P60371	365 aa	Predicted RBP	3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	CYCS	P99999	105 aa	Known RBP	3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	PPP1R1A	Q13522	171 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	FAM74A4	Q5TZK3	123 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	PRR27	Q6MZM9	219 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	GOLT1A	Q6ZVE7	132 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	PHF5A	Q7RTV0	110 aa	Known RBP	3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	KRTAP11-1	Q8IUC1	163 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	MITD1	Q8WV92	249 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	MCUB	Q9NWR8	336 aa		3.77	□□□□□ -1.81
DNMT1-222	ENST00000590619	IGLV4-60	A0A075B6I1	120 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	IGLV7-46	A0A075B6I9	117 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	GAGE12H	A6NDE8	117 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	CFC1B	P0CG36	223 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	S100A4	P26447	101 aa	Known RBP	3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	PTTG1IP	P53801	180 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	RAB2A	P61019	212 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	ASB16-AS1	Q495Z4	193 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	MZT2A	Q6P582	158 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	LINC00299	Q6ZSB3	139 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	NEXN-AS1	Q8NBZ9	246 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	SMIM4	Q8WVI0	70 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	SFRP2	Q96HF1	295 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	MLST8	Q9BVC4	326 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	UQCC1	Q9NVA1	299 aa		3.76	□□□□□ -1.81
DNMT1-222	ENST00000590619	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	CST7	O76096	145 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	SCGB1D2	O95969	90 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	GCG	P01275	180 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	MRPS10	P82664	201 aa	Known RBP	3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	GAGE2B	Q13066	116 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	KRTAP19-2	Q3LHN2	52 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	C9orf116	Q5BN46	136 aa	Predicted RBP	3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	MCFD2	Q8NI22	146 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	S100Z	Q8WXG8	99 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	LINC00526	Q96FQ7	95 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	DERL1	Q9BUN8	251 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	MIXL1	Q9H2W2	232 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	RPP21	Q9H633	154 aa	Known RBP	3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	IL36B	Q9NZH7	164 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	OR5AC2	Q9NZP5	309 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619	USH2A	O75445	5202 aa		3.75	□□□□□ -1.81
DNMT1-222	ENST00000590619		A0A087WZ39	114 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	TRBV6-1	A0A0K0K1D8	114 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619		A0A1B0GUV1	79 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619		A0A1B0GVG6	124 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	EIF3G	O75821	320 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	ARMS2	P0C7Q2	107 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	FGF7	P21781	194 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	S100A5	P33763	92 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	GNG5	P63218	68 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	EIF5A	P63241	154 aa	Known RBP	3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	BAX	Q07812	192 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	SPANXN2	Q5MJ10	180 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	CMTM2	Q8TAZ6	248 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	OTOR	Q9NRC9	128 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	GSKIP	Q9P0R6	139 aa		3.74	□□□□□ -1.81
DNMT1-222	ENST00000590619	TRBV25-1	A0A075B6N4	114 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	TRAV6	A0A075B6T7	132 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	LOC100996750	A0A140TA64	210 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	UBE2L5P	A0A1B0GUS4	154 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	C9orf170	A2RU37	121 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	CTDSP2	O14595	271 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	OR7C2	O60412	319 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	BCAP31	P51572	246 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	IQCJ	Q1A5X6	159 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	TMEM97	Q5BJF2	176 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	FAM162B	Q5T6X4	162 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	AQP10	Q96PS8	301 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	SSBP4	Q9BWG4	385 aa	Predicted RBP	3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	KRTAP4-6	Q9BYQ5	205 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	LYRM2	Q9NU23	88 aa	Predicted RBP	3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	MBD2	Q9UBB5	411 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	PHLDA3	Q9Y5J5	127 aa		3.73	□□□□□ -1.81
DNMT1-222	ENST00000590619	hCG_2014768	A0A024R1R8	64 aa		3.72	□□□□□ -1.81
DNMT1-222	ENST00000590619		H3BVH4	76 aa		3.72	□□□□□ -1.81
DNMT1-222	ENST00000590619	RGS5	O15539	181 aa		3.72	□□□□□ -1.81
DNMT1-222	ENST00000590619	S100A11	P31949	105 aa		3.72	□□□□□ -1.81
DNMT1-222	ENST00000590619	RAB4B	P61018	213 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms