RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 A0A087X0K7 114 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.22
ZNF540-209ENST00000590588 SLC25A5P05141 298 aaKnown RBP7.46□□□□□ -1.22
ZNF540-209ENST00000590588 PYYP10082 97 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 ESDP10768 282 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 Q6AWC8 147 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 HIST3H2BBQ8N257 126 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 CMTM2Q8TAZ6 248 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 C12orf57Q99622 126 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 FAM30AQ9NZY2 134 aa7.46□□□□□ -1.22
ZNF540-209ENST00000590588 A0A096LPF7 62 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 TRAV5A0A0B4J249 113 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 A0A1B0GW15 77 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 PGPA6NDG6 321 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 NPIPB6E9PJ23 425 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 NTN5Q8WTR8 489 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-209ENST00000590588 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 MRPL53Q96EL3 112 aaKnown RBP7.45□□□□□ -1.22
ZNF540-209ENST00000590588 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 AAMDCQ9H7C9 122 aa7.45□□□□□ -1.22
ZNF540-209ENST00000590588 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 TRAV12-2A0A075B6T6 113 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 A8MWL6 223 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
ZNF540-209ENST00000590588 NXPH4O95158 308 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 NDUFA6P56556 154 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 FAM162BQ5T6X4 162 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 Q86TA4 180 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 OR8I2Q8N0Y5 310 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 LINC00612Q8N6U2 182 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 RNASE8Q8TDE3 154 aaKnown RBP7.44□□□□□ -1.22
ZNF540-209ENST00000590588 TMEM263Q8WUH6 116 aaKnown RBP7.44□□□□□ -1.22
ZNF540-209ENST00000590588 TMEM18Q96B42 140 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
ZNF540-209ENST00000590588 RBAKDNA6NC62 111 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 C19orf71A6NCJ1 209 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 K7EP13 123 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 CSN1S1P47710 185 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 FOXA3P55318 350 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-209ENST00000590588 RANP62826 216 aaKnown RBP7.43□□□□□ -1.22
ZNF540-209ENST00000590588 Q0VG73 95 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 OR10J3Q5JRS4 329 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 SLC50A1Q9BRV3 221 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
ZNF540-209ENST00000590588 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 XKRY2A2RUG3 117 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 PGPEP1LA6NFU8 196 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 GAGE7O76087 117 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 VSIG2Q96IQ7 327 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 RPP21Q9H633 154 aaKnown RBP7.42□□□□□ -1.22
ZNF540-209ENST00000590588 LRP2P98164 4655 aa7.42□□□□□ -1.22
ZNF540-209ENST00000590588 MGST1P10620 155 aaKnown RBP7.41□□□□□ -1.22
ZNF540-209ENST00000590588 GATD1Q8NB37 220 aa7.41□□□□□ -1.22
ZNF540-209ENST00000590588 DAZAP1Q96EP5 407 aaKnown RBP7.41□□□□□ -1.22
ZNF540-209ENST00000590588 ZNF331Q9NQX6 463 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-209ENST00000590588 PPP1R14DQ9NXH3 145 aa7.41□□□□□ -1.22
ZNF540-209ENST00000590588 P01737 135 aa7.4□□□□□ -1.22
ZNF540-209ENST00000590588 RPS20P60866 119 aaKnown RBP7.4□□□□□ -1.22
ZNF540-209ENST00000590588 PSG3Q16557 428 aa7.4□□□□□ -1.22
ZNF540-209ENST00000590588 NUDT10Q8NFP7 164 aa7.4□□□□□ -1.22
ZNF540-209ENST00000590588 BLNKQ8WV28 456 aa7.4□□□□□ -1.22
ZNF540-209ENST00000590588 NUDT11Q96G61 164 aa7.4□□□□□ -1.22
ZNF540-209ENST00000590588 HIST1H2BLQ99880 126 aa7.4□□□□□ -1.22
ZNF540-209ENST00000590588 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
ZNF540-209ENST00000590588 A0A1B0GXF2 115 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 IFITM10A6NMD0 228 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 SNURFLB1AK76 121 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 DIRC3C9JPN6 131 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 PSCAO43653 123 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 IGLV2-11P01706 119 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 CT45A10P0DMU9 189 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 CRISP2P16562 243 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 RAB4AP20338 218 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 EVI2AP22794 236 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 JOSD1Q15040 202 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-209ENST00000590588 LYPD5Q6UWN5 251 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 RNASE7Q9H1E1 156 aaKnown RBP7.39□□□□□ -1.23
ZNF540-209ENST00000590588 LENEPQ9Y5L5 61 aa7.39□□□□□ -1.23
ZNF540-209ENST00000590588 LRCOL1A6NCL2 159 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 SLC17A3O00476 420 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 CDKN1BP46527 198 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 HBBP68871 147 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 IGFL4Q6B9Z1 124 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 Q8N814 137 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 C20orf144Q9BQM9 153 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 PSG8Q9UQ74 426 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 ICOSQ9Y6W8 199 aa7.38□□□□□ -1.23
ZNF540-209ENST00000590588 TRBV7-9A0A0J9YWB2 115 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 GNG5P63218 68 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 HIST1H1AQ02539 215 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-209ENST00000590588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.37□□□□□ -1.23
ZNF540-209ENST00000590588 Q6ZSA8 131 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms