RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 IBA57-AS1B1ANH7 110 aa11.5□□□□□ -0.57
RETREG3-210ENST00000590541 KRBOX1C9JBD0 128 aa11.5□□□□□ -0.57
RETREG3-210ENST00000590541 OXTP01178 125 aa11.5□□□□□ -0.57
RETREG3-210ENST00000590541 AKR1C3P42330 323 aa11.5□□□□□ -0.57
RETREG3-210ENST00000590541 ZNF674Q2M3X9 581 aa11.5□□□□□ -0.57
RETREG3-210ENST00000590541 FAM213BQ8TBF2 198 aa11.5□□□□□ -0.57
RETREG3-210ENST00000590541 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
RETREG3-210ENST00000590541 PAGE4O60829 102 aa11.49□□□□□ -0.57
RETREG3-210ENST00000590541 PFDN1O60925 122 aa11.49□□□□□ -0.57
RETREG3-210ENST00000590541 CRIP1P50238 77 aa11.49□□□□□ -0.57
RETREG3-210ENST00000590541 PARLQ9H300 379 aa11.49□□□□□ -0.57
RETREG3-210ENST00000590541 RHODO00212 210 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 SH2D1AO60880 128 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 H2AFB1P0C5Y9 115 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 TPT1P13693 172 aaKnown RBP11.48□□□□□ -0.57
RETREG3-210ENST00000590541 WFDC2Q14508 124 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 LINC01559Q495D7 138 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 LINC01556Q5JQF7 62 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 ATP6V0E2Q8NHE4 81 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 GTSF1LQ9H1H1 148 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 Q9HAA7 133 aa11.48□□□□□ -0.57
RETREG3-210ENST00000590541 IGHV3-73A0A0B4J1V6 119 aa11.47□□□□□ -0.57
RETREG3-210ENST00000590541 RAB5CP51148 216 aa11.47□□□□□ -0.57
RETREG3-210ENST00000590541 LELP1Q5T871 98 aa11.47□□□□□ -0.57
RETREG3-210ENST00000590541 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
RETREG3-210ENST00000590541 TMUB2Q71RG4 321 aa11.47□□□□□ -0.57
RETREG3-210ENST00000590541 H3BVH4 76 aa11.46□□□□□ -0.57
RETREG3-210ENST00000590541 M0R036 132 aa11.46□□□□□ -0.57
RETREG3-210ENST00000590541 ARMS2P0C7Q2 107 aa11.46□□□□□ -0.57
RETREG3-210ENST00000590541 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.57
RETREG3-210ENST00000590541 SCXQ7RTU7 201 aa11.46□□□□□ -0.57
RETREG3-210ENST00000590541 PHLDA3Q9Y5J5 127 aa11.46□□□□□ -0.57
RETREG3-210ENST00000590541 DMRTA1Q5VZB9 504 aa11.45□□□□□ -0.58
RETREG3-210ENST00000590541 UFSP1Q6NVU6 142 aa11.45□□□□□ -0.58
RETREG3-210ENST00000590541 TEX46H3BTG2 121 aa11.44□□□□□ -0.58
RETREG3-210ENST00000590541 CXCL1P09341 107 aa11.44□□□□□ -0.58
RETREG3-210ENST00000590541 ZFP82Q8N141 532 aa11.44□□□□□ -0.58
RETREG3-210ENST00000590541 MANBALQ9NQG1 85 aa11.44□□□□□ -0.58
RETREG3-210ENST00000590541 A0A087WWC5 75 aa11.43□□□□□ -0.58
RETREG3-210ENST00000590541 TRAV1-1A0A0B4J248 108 aa11.43□□□□□ -0.58
RETREG3-210ENST00000590541 GRIFINA4D1Z8 144 aa11.43□□□□□ -0.58
RETREG3-210ENST00000590541 BAGE2Q86Y30 109 aa11.43□□□□□ -0.58
RETREG3-210ENST00000590541 SFRP2Q96HF1 295 aa11.43□□□□□ -0.58
RETREG3-210ENST00000590541 SCO2A0A1W2PP80 73 aa11.42□□□□□ -0.58
RETREG3-210ENST00000590541 LINC00694P0DN24 101 aa11.42□□□□□ -0.58
RETREG3-210ENST00000590541 LINC01620Q4KN68 170 aa11.42□□□□□ -0.58
RETREG3-210ENST00000590541 TCTE3Q8IZS6 198 aa11.42□□□□□ -0.58
RETREG3-210ENST00000590541 MLST8Q9BVC4 326 aa11.42□□□□□ -0.58
RETREG3-210ENST00000590541 A0A1B0GV50 99 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 IGHV3-30P01768 117 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 IGHV3-33P01772 117 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 IGHV3-30-5P0DP03 117 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 LAGE3Q14657 143 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 SAMD10Q9BYL1 202 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 JPT2Q9H910 190 aa11.41□□□□□ -0.58
RETREG3-210ENST00000590541 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.58
RETREG3-210ENST00000590541 GAGE12JA6NER3 117 aa11.4□□□□□ -0.58
RETREG3-210ENST00000590541 M0R381 172 aa11.4□□□□□ -0.58
RETREG3-210ENST00000590541 GAGE1Q13065 139 aa11.4□□□□□ -0.58
RETREG3-210ENST00000590541 GAGE4Q13068 117 aa11.4□□□□□ -0.58
RETREG3-210ENST00000590541 GAGE5Q13069 117 aa11.4□□□□□ -0.58
RETREG3-210ENST00000590541 GAGE13Q4V321 117 aa11.4□□□□□ -0.58
RETREG3-210ENST00000590541 TMSB15BA0A087X1C1 80 aa11.39□□□□□ -0.59
RETREG3-210ENST00000590541 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
RETREG3-210ENST00000590541 LECT2O14960 151 aa11.39□□□□□ -0.59
RETREG3-210ENST00000590541 FAM74A4Q5TZK3 123 aa11.39□□□□□ -0.59
RETREG3-210ENST00000590541 C11orf52Q96A22 123 aa11.39□□□□□ -0.59
RETREG3-210ENST00000590541 TM2D2Q9BX73 214 aa11.39□□□□□ -0.59
RETREG3-210ENST00000590541 PKHD1L1Q86WI1 4243 aa11.39□□□□□ -0.59
RETREG3-210ENST00000590541 SULT1A2P50226 295 aa11.38□□□□□ -0.59
RETREG3-210ENST00000590541 C14orf178Q8N769 122 aaPredicted RBP11.38□□□□□ -0.59
RETREG3-210ENST00000590541 CHAC1Q9BUX1 264 aa11.38□□□□□ -0.59
RETREG3-210ENST00000590541 GNG13Q9P2W3 67 aa11.38□□□□□ -0.59
RETREG3-210ENST00000590541 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
RETREG3-210ENST00000590541 RPL35P42766 123 aaKnown RBP11.37□□□□□ -0.59
RETREG3-210ENST00000590541 TOR2AQ5JU69 321 aa11.37□□□□□ -0.59
RETREG3-210ENST00000590541 SLC51BQ86UW2 128 aa11.37□□□□□ -0.59
RETREG3-210ENST00000590541 CIRBP-AS1Q8TBR5 109 aa11.37□□□□□ -0.59
RETREG3-210ENST00000590541 SMIM12Q96EX1 92 aa11.37□□□□□ -0.59
RETREG3-210ENST00000590541 SSBP4Q9BWG4 385 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-210ENST00000590541 RNF213Q63HN8 5207 aa11.36□□□□□ -0.59
RETREG3-210ENST00000590541 A0A087WWL8 130 aa11.36□□□□□ -0.59
RETREG3-210ENST00000590541 SNAI2O43623 268 aa11.36□□□□□ -0.59
RETREG3-210ENST00000590541 PDE6DO43924 150 aa11.36□□□□□ -0.59
RETREG3-210ENST00000590541 IFNA1P01562 189 aa11.36□□□□□ -0.59
RETREG3-210ENST00000590541 RPL36AP83881 106 aaKnown RBP11.36□□□□□ -0.59
RETREG3-210ENST00000590541 Q8N3U1 123 aa11.36□□□□□ -0.59
RETREG3-210ENST00000590541 RPL36ALQ969Q0 106 aaKnown RBP11.36□□□□□ -0.59
RETREG3-210ENST00000590541 TRAV8-3A0A0A6YYJ7 113 aa11.35□□□□□ -0.59
RETREG3-210ENST00000590541 RAB4BP61018 213 aa11.35□□□□□ -0.59
RETREG3-210ENST00000590541 CCL20P78556 96 aa11.35□□□□□ -0.59
RETREG3-210ENST00000590541 TRBV7-3A0A075B6L6 115 aa11.34□□□□□ -0.59
RETREG3-210ENST00000590541 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
RETREG3-210ENST00000590541 MEF2BQ02080 365 aaPredicted RBP11.34□□□□□ -0.59
RETREG3-210ENST00000590541 SPANXN1Q5VSR9 72 aa11.34□□□□□ -0.59
RETREG3-210ENST00000590541 PRR27Q6MZM9 219 aa11.34□□□□□ -0.59
RETREG3-210ENST00000590541 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
RETREG3-210ENST00000590541 BIN3Q9NQY0 253 aa11.34□□□□□ -0.59
RETREG3-210ENST00000590541 Q9UF83 564 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms