RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 C6orf223Q8N319 242 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 C11orf52Q96A22 123 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 MLST8Q9BVC4 326 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 MANBALQ9NQG1 85 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 LOC100131303A0A0U1RQF7 123 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 M0R036 132 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 CIDEAO60543 219 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 NXPH4O95158 308 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 SRIP30626 198 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 RNF151Q2KHN1 245 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 TTC32Q5I0X7 151 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 NHLRC2Q8NBF2 726 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 SCRT2Q9NQ03 307 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 GNG13Q9P2W3 67 aa7.66□□□□□ -1.18
SMAD4-211ENST00000590499 H3BVH4 76 aa7.65□□□□□ -1.18
SMAD4-211ENST00000590499 S100A4P26447 101 aaKnown RBP7.65□□□□□ -1.18
SMAD4-211ENST00000590499 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.18
SMAD4-211ENST00000590499 SLC25A29Q8N8R3 303 aa7.65□□□□□ -1.18
SMAD4-211ENST00000590499 PCNPQ8WW12 178 aaKnown RBP7.65□□□□□ -1.18
SMAD4-211ENST00000590499 PARLQ9H300 379 aa7.65□□□□□ -1.18
SMAD4-211ENST00000590499 APOBP04114 4563 aaKnown RBP7.64□□□□□ -1.19
SMAD4-211ENST00000590499 IGHV3-73A0A0B4J1V6 119 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 A0A1B0GVG6 124 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 TRBV6-4A0A1B0GX49 114 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 GRIFINA4D1Z8 144 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 SIVA1O15304 175 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 ARMS2P0C7Q2 107 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 BTF3P20290 206 aaKnown RBP7.64□□□□□ -1.19
SMAD4-211ENST00000590499 RPL35P42766 123 aaKnown RBP7.64□□□□□ -1.19
SMAD4-211ENST00000590499 TIRAPP58753 221 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 ZFP2Q6ZN57 461 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 BAGE2Q86Y30 109 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 TXNDC17Q9BRA2 123 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 DERL1Q9BUN8 251 aa7.64□□□□□ -1.19
SMAD4-211ENST00000590499 A8MWV9 139 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 TEX46H3BTG2 121 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 CXCL1P09341 107 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 MGST1P10620 155 aaKnown RBP7.63□□□□□ -1.19
SMAD4-211ENST00000590499 RHOHQ15669 191 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 Q6ZSN1 163 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 SH2D6Q7Z4S9 175 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 SAMD10Q9BYL1 202 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 JPT2Q9H910 190 aa7.63□□□□□ -1.19
SMAD4-211ENST00000590499 TMSB15BA0A087X1C1 80 aa7.62□□□□□ -1.19
SMAD4-211ENST00000590499 LINC00694P0DN24 101 aa7.62□□□□□ -1.19
SMAD4-211ENST00000590499 BCL2P10415 239 aa7.62□□□□□ -1.19
SMAD4-211ENST00000590499 RPL19P84098 196 aaKnown RBP7.62□□□□□ -1.19
SMAD4-211ENST00000590499 MEF2BQ02080 365 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-211ENST00000590499 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-211ENST00000590499 WFDC10BQ8IUB3 73 aa7.62□□□□□ -1.19
SMAD4-211ENST00000590499 PRADC1Q9BSG0 188 aa7.62□□□□□ -1.19
SMAD4-211ENST00000590499 HSPG2P98160 4391 aa7.61□□□□□ -1.19
SMAD4-211ENST00000590499 IGLV2-8P01709 118 aa7.61□□□□□ -1.19
SMAD4-211ENST00000590499 LINC00315P59091 139 aa7.61□□□□□ -1.19
SMAD4-211ENST00000590499 CENPWQ5EE01 88 aa7.61□□□□□ -1.19
SMAD4-211ENST00000590499 PHLDA3Q9Y5J5 127 aa7.61□□□□□ -1.19
SMAD4-211ENST00000590499 TRBV20OR9-2A0A075B6H5 130 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 RHODO00212 210 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 SNAI2O43623 268 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 PDE6DO43924 150 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 IFNA1P01562 189 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 CRYGDP07320 174 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 ALKAL2Q6UX46 152 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 ZFP82Q8N141 532 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 SFRP2Q96HF1 295 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 Q9UF83 564 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 VAX2Q9UIW0 290 aa7.6□□□□□ -1.19
SMAD4-211ENST00000590499 RAB19A4D1S5 217 aa7.59□□□□□ -1.19
SMAD4-211ENST00000590499 M0R381 172 aa7.59□□□□□ -1.19
SMAD4-211ENST00000590499 TAGLN2P37802 199 aaKnown RBP7.59□□□□□ -1.19
SMAD4-211ENST00000590499 NKX2-5P52952 324 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-211ENST00000590499 PRR27Q6MZM9 219 aa7.59□□□□□ -1.19
SMAD4-211ENST00000590499 C14orf178Q8N769 122 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-211ENST00000590499 OR10AG1Q8NH19 301 aa7.59□□□□□ -1.19
SMAD4-211ENST00000590499 LYPD6BQ8NI32 183 aa7.59□□□□□ -1.19
SMAD4-211ENST00000590499 SMIM12Q96EX1 92 aa7.59□□□□□ -1.19
SMAD4-211ENST00000590499 LY96Q9Y6Y9 160 aa7.59□□□□□ -1.19
SMAD4-211ENST00000590499 A0A087WWL8 130 aa7.58□□□□□ -1.2
SMAD4-211ENST00000590499 C19orf71A6NCJ1 209 aa7.58□□□□□ -1.2
SMAD4-211ENST00000590499 K7EP13 123 aa7.58□□□□□ -1.2
SMAD4-211ENST00000590499 OR5AL1P0C617 328 aa7.58□□□□□ -1.2
SMAD4-211ENST00000590499 GTSF1LQ9H1H1 148 aa7.58□□□□□ -1.2
SMAD4-211ENST00000590499 MED9Q9NWA0 146 aa7.58□□□□□ -1.2
SMAD4-211ENST00000590499 GNG4P50150 75 aa7.57□□□□□ -1.2
SMAD4-211ENST00000590499 BLOC1S1P78537 153 aa7.57□□□□□ -1.2
SMAD4-211ENST00000590499 LINC01556Q5JQF7 62 aa7.57□□□□□ -1.2
SMAD4-211ENST00000590499 LELP1Q5T871 98 aa7.57□□□□□ -1.2
SMAD4-211ENST00000590499 FAM74A4Q5TZK3 123 aa7.57□□□□□ -1.2
SMAD4-211ENST00000590499 ATP6V0E2Q8NHE4 81 aa7.57□□□□□ -1.2
SMAD4-211ENST00000590499 TNFRSF18Q9Y5U5 241 aa7.57□□□□□ -1.2
SMAD4-211ENST00000590499 TRAV9-2A0A087WT02 112 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 IGHV3-38A0A0C4DH36 116 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 GAGE12JA6NER3 117 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 IGLC6P0CF74 106 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 EVI2AP22794 236 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 GAGE1Q13065 139 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 GAGE4Q13068 117 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 GAGE5Q13069 117 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms