RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 MC5RP33032 325 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 LGALS7P47929 136 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 PET117Q6UWS5 81 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 RBPMS2Q6ZRY4 209 aaKnown RBP5.6□□□□□ -1.51
SMAD4-209ENST00000589941 ZNF738Q8NE65 137 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 LINC00479Q96M42 142 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 SRSF8Q9BRL6 282 aaKnown RBP5.6□□□□□ -1.51
SMAD4-209ENST00000589941 MS4A6AQ9H2W1 248 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 IGLV2-18A0A075B6J9 118 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 TRAV30A0A087WSZ9 112 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 LOC102724200A0A096LPH7 203 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-209ENST00000589941 IGHV1-24A0A0C4DH33 117 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 A0A1B0GW15 77 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 SYS1-DBNDD2H3BUS1 97 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 J3KRW8 73 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 MOSP00540 346 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 TRBV12-3P01733 135 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 TCRAP04437 139 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 NBEAP1P0C6P0 100 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 NTF3P20783 257 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 BMI1P35226 326 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 RBX1P62877 108 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 VMA21Q3ZAQ7 101 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 LEMD1Q68G75 181 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 Q6ZR54 194 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 LINC00305Q7Z4B0 112 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 Q86TA4 180 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 GTSF1Q8WW33 167 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 OTORQ9NRC9 128 aa5.59□□□□□ -1.51
SMAD4-209ENST00000589941 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 PGPA6NDG6 321 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 OR4C46A6NHA9 309 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 IGLV2-11P01706 119 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 PPBPP02775 128 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 SLC25A5P05141 298 aaKnown RBP5.58□□□□□ -1.52
SMAD4-209ENST00000589941 CDKN1BP46527 198 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 GNG5P63218 68 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 BATFQ16520 125 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 MAJINQ3KP22 176 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 C10orf55Q5SWW7 151 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 Q5VSD8 79 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 LINC01545Q5VT33 79 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 UNQ5815/PRO19632Q6UWF5 114 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 COX8CQ7Z4L0 72 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 PMCHL2Q9BQD1 86 aa5.58□□□□□ -1.52
SMAD4-209ENST00000589941 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
SMAD4-209ENST00000589941 hDV102S1A0JD36 115 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 TAX1BP3O14907 124 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 P01737 135 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 IGLC1P0CG04 106 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 FCGR2BP31994 310 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-209ENST00000589941 LGALS9BQ3B8N2 356 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 Q56UQ5 140 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 PAPPA-AS1Q5QFB9 102 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 BVES-AS1Q5T3Y7 98 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 Q6AWC8 147 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 RNASEKQ6P5S7 137 aaKnown RBP5.57□□□□□ -1.52
SMAD4-209ENST00000589941 ZNF493Q6ZR52 646 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 TCF24Q7RTU0 167 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 LYPD1Q8N2G4 141 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 TMEM75Q8N9X5 138 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 RNF5Q99942 180 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 TMEM191AQ9H0A3 160 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 Q9H3A6 140 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 TP53TG1Q9Y2A0 90 aa5.57□□□□□ -1.52
SMAD4-209ENST00000589941 CHTOPQ9Y3Y2 248 aaKnown RBP5.57□□□□□ -1.52
SMAD4-209ENST00000589941 F11RQ9Y624 299 aaKnown RBP5.57□□□□□ -1.52
SMAD4-209ENST00000589941 IGHV4-4A0A075B6R2 117 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 MRPS12O15235 138 aaKnown RBP5.56□□□□□ -1.52
SMAD4-209ENST00000589941 DEFB4AO15263 64 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 RPL27AP46776 148 aaKnown RBP5.56□□□□□ -1.52
SMAD4-209ENST00000589941 HINT1P49773 126 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-209ENST00000589941 TCTAP57738 103 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 SAPCD1Q5SSQ6 148 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 SLC25A34Q6PIV7 304 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 ATOH7Q8N100 152 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 C11orf45Q8TAV5 145 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 RNASE8Q8TDE3 154 aaKnown RBP5.56□□□□□ -1.52
SMAD4-209ENST00000589941 CLEC5AQ9NY25 188 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 HSPB8Q9UJY1 196 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 RNF24Q9Y225 148 aa5.56□□□□□ -1.52
SMAD4-209ENST00000589941 IGLV5-37A0A075B6J1 123 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 H3BRN7 92 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 I3L2K1 104 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 COX8AP10176 69 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 CAMPP49913 170 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 HIST1H1AQ02539 215 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-209ENST00000589941 LINC00173Q6ZV60 143 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 POM121L12Q8N7R1 296 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 OR2K2Q8NGT1 345 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 SHANK2-AS3Q9BTD1 123 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 C1QTNF4Q9BXJ3 329 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 HIGD1AQ9Y241 93 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
SMAD4-209ENST00000589941 LRP2P98164 4655 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 TRBV19A0A075B6N1 114 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.54□□□□□ -1.52
SMAD4-209ENST00000589941 A0A1B0GUT8 65 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 SERTM2A0A1B0GWG4 89 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms