RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 ZMAT4Q9H898 229 aa7.95□□□□□ -1.14
ZNF540-208ENST00000589857 COX11Q9Y6N1 276 aa7.95□□□□□ -1.14
ZNF540-208ENST00000589857 LINC01619G3V211 115 aa7.94□□□□□ -1.14
ZNF540-208ENST00000589857 CDKN1BP46527 198 aa7.94□□□□□ -1.14
ZNF540-208ENST00000589857 SYNJ2BPP57105 145 aa7.94□□□□□ -1.14
ZNF540-208ENST00000589857 ODF1Q14990 250 aa7.94□□□□□ -1.14
ZNF540-208ENST00000589857 BVES-AS1Q5T3Y7 98 aa7.94□□□□□ -1.14
ZNF540-208ENST00000589857 C4orf3Q8WVX3 66 aa7.94□□□□□ -1.14
ZNF540-208ENST00000589857 MGAM2Q2M2H8 2515 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 IGHV4OR15-8A0A075B7B6 117 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 IGHV1OR15-1A0A075B7D0 117 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 A0A087WW49 117 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 A0A087WX48 190 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 F6UB75 175 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 H7C1H1 209 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 CD7P09564 240 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 ZNF688P0C7X2 276 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 RNASE3P12724 160 aaKnown RBP7.93□□□□□ -1.14
ZNF540-208ENST00000589857 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
ZNF540-208ENST00000589857 MPV17L2Q567V2 206 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 PAPPA-AS1Q5QFB9 102 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 C14orf178Q8N769 122 aaPredicted RBP7.93□□□□□ -1.14
ZNF540-208ENST00000589857 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 C18orf15Q96N68 181 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 HIGD1BQ9P298 99 aa7.93□□□□□ -1.14
ZNF540-208ENST00000589857 TRAV26-2A0A0B4J265 109 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 TFPI2P48307 235 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 ANKRD39Q53RE8 183 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 RASL10AQ92737 203 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 C9orf85Q96MD7 179 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 DUX5Q96PT3 197 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 SCGB3A1Q96QR1 104 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 KIR2DL4Q99706 377 aa7.92□□□□□ -1.14
ZNF540-208ENST00000589857 MCRIP2Q9BUT9 160 aaKnown RBP7.92□□□□□ -1.14
ZNF540-208ENST00000589857 TRAV12-3A0A0B4J271 114 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 VCYO14598 125 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 GNRH2O43555 120 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 FGF6P10767 208 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 NMUP48645 174 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 FXYD7P58549 80 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 TCTEX1D4Q5JR98 221 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 DKK2Q9UBU2 259 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 MEGF8Q7Z7M0 2845 aa7.91□□□□□ -1.14
ZNF540-208ENST00000589857 IGHV3-16A0A0C4DH30 117 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 TRBV6-5A0A0K0K1A5 114 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 F8VRH5 84 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 GAS8-AS1O95177 125 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 UBE2V1Q13404 147 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 PIK3CD-AS1Q5SR53 167 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 C2orf91Q6ZV80 131 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 ERASQ7Z444 233 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 TMEM141Q96I45 108 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 CSTL1Q9H114 145 aa7.9□□□□□ -1.14
ZNF540-208ENST00000589857 TRAV25A0A0B4J276 109 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 A8MTW9 85 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 F5H697 171 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 PTTG1IPP53801 180 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 CMC4P56277 68 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-208ENST00000589857 RHOHQ15669 191 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 VAMP3Q15836 100 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 TAL2Q16559 108 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 TRPT1Q86TN4 253 aaKnown RBP7.89□□□□□ -1.15
ZNF540-208ENST00000589857 CHTOPQ9Y3Y2 248 aaKnown RBP7.89□□□□□ -1.15
ZNF540-208ENST00000589857 KIF25-AS1Q9Y6Z4 181 aa7.89□□□□□ -1.15
ZNF540-208ENST00000589857 DEFB1P60022 68 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 HERVK_113P61574 105 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 ZNF124Q15973 351 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 ZC2HC1BQ5TFG8 222 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 SUMO4Q6EEV6 95 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 C10orf99Q6UWK7 81 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 Q6ZQT7 251 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 PTH2Q96A98 100 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 RAX2Q96IS3 184 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 CLUHP3Q96NS8 147 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 LINC00467Q9BRT7 94 aa7.88□□□□□ -1.15
ZNF540-208ENST00000589857 H3BRM9 83 aa7.87□□□□□ -1.15
ZNF540-208ENST00000589857 TAX1BP3O14907 124 aa7.87□□□□□ -1.15
ZNF540-208ENST00000589857 KHDC1LQ5JSQ8 128 aa7.87□□□□□ -1.15
ZNF540-208ENST00000589857 RPL39LQ96EH5 51 aaKnown RBP7.87□□□□□ -1.15
ZNF540-208ENST00000589857 TIMM17AQ99595 171 aa7.87□□□□□ -1.15
ZNF540-208ENST00000589857 SPAG8Q99932 426 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-208ENST00000589857 EDA2RQ9HAV5 297 aa7.87□□□□□ -1.15
ZNF540-208ENST00000589857 MRPL35Q9NZE8 188 aaKnown RBP7.87□□□□□ -1.15
ZNF540-208ENST00000589857 HHLA3Q9XRX5 114 aa7.87□□□□□ -1.15
ZNF540-208ENST00000589857 ZNF256Q9Y2P7 627 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-208ENST00000589857 WNK2Q9Y3S1 2297 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 TRBV27A0A0K0K1C4 114 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 CBY3A6NI87 242 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 OR11H12B2RN74 326 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 RNASE1P07998 156 aaKnown RBP7.86□□□□□ -1.15
ZNF540-208ENST00000589857 NPSP0C0P6 89 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 EDN2P20800 178 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 POLR2KP53803 58 aaKnown RBP7.86□□□□□ -1.15
ZNF540-208ENST00000589857 LINC00315P59091 139 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 ZNF56Q15929 161 aa7.86□□□□□ -1.15
ZNF540-208ENST00000589857 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms