RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 C3orf84H3BNL1 204 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 HOXA5P20719 270 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 SMIM15Q7Z3B0 74 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 RPS10P5Q9NQ39 176 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 A0A087WWC5 75 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 IGHV3-73A0A0B4J1V6 119 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 IGLL5B9A064 214 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 RIGQ13278 110 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 FHL2Q14192 279 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 FAM210BQ96KR6 192 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 SAMD10Q9BYL1 202 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 PRO0255Q9UI72 69 aa9.59□□□□□ -0.87
VMP1-210ENST00000589823 DYNC2H1Q8NCM8 4307 aaKnown RBP9.58□□□□□ -0.88
VMP1-210ENST00000589823 CRYGDP07320 174 aa9.58□□□□□ -0.88
VMP1-210ENST00000589823 KCNIP4Q6PIL6 250 aa9.58□□□□□ -0.88
VMP1-210ENST00000589823 C14orf178Q8N769 122 aaPredicted RBP9.58□□□□□ -0.88
VMP1-210ENST00000589823 IMMP2LQ96T52 175 aa9.58□□□□□ -0.88
VMP1-210ENST00000589823 TMEM242Q9NWH2 141 aa9.58□□□□□ -0.88
VMP1-210ENST00000589823 HHLA3Q9XRX5 114 aa9.58□□□□□ -0.88
VMP1-210ENST00000589823 TRAV26-1A0A087WT03 109 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 A0A0J9YY99 117 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 PAX4O43316 350 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 GATA1P15976 413 aaPredicted RBP9.57□□□□□ -0.88
VMP1-210ENST00000589823 S100PP25815 95 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 FAM3BP58499 235 aaPredicted RBP9.57□□□□□ -0.88
VMP1-210ENST00000589823 ZNF56Q15929 161 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 TMEM88Q6PEY1 159 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 DPH3P1Q9H4G8 78 aa9.57□□□□□ -0.88
VMP1-210ENST00000589823 A0A1B0GW15 77 aa9.56□□□□□ -0.88
VMP1-210ENST00000589823 F5H697 171 aa9.56□□□□□ -0.88
VMP1-210ENST00000589823 MGPP08493 103 aa9.56□□□□□ -0.88
VMP1-210ENST00000589823 EVI2AP22794 236 aa9.56□□□□□ -0.88
VMP1-210ENST00000589823 CRYBA4P53673 196 aa9.56□□□□□ -0.88
VMP1-210ENST00000589823 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
VMP1-210ENST00000589823 TRBV6-4A0A1B0GX49 114 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 S100A8P05109 93 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 RAB4BP61018 213 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 RHOHQ15669 191 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 CASC10Q5T4H9 136 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 MRPL54Q6P161 138 aaKnown RBP9.55□□□□□ -0.88
VMP1-210ENST00000589823 ATP5L2Q7Z4Y8 100 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 C15orf53Q8NAA6 179 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 PRADC1Q9BSG0 188 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 KIF25-AS1Q9Y6Z4 181 aa9.55□□□□□ -0.88
VMP1-210ENST00000589823 H3BNG1 76 aa9.54□□□□□ -0.88
VMP1-210ENST00000589823 CAMPP49913 170 aa9.54□□□□□ -0.88
VMP1-210ENST00000589823 TCTAP57738 103 aa9.54□□□□□ -0.88
VMP1-210ENST00000589823 HBBP68871 147 aa9.54□□□□□ -0.88
VMP1-210ENST00000589823 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
VMP1-210ENST00000589823 STARD9Q9P2P6 4700 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 TRAV9-1A0A075B6T8 112 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 K7EQD1 137 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 NUDT3O95989 172 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 Q6ZSN1 163 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 VSIG2Q96IQ7 327 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 ICOSQ9Y6W8 199 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 URGCP-MRPS24S4R325 110 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 CSMD3Q7Z407 3707 aa9.53□□□□□ -0.88
VMP1-210ENST00000589823 NACAE9PAV3 2078 aa9.52□□□□□ -0.88
VMP1-210ENST00000589823 A0A1B0GXF2 115 aa9.52□□□□□ -0.89
VMP1-210ENST00000589823 GYPEP15421 78 aa9.52□□□□□ -0.89
VMP1-210ENST00000589823 LINC00315P59091 139 aa9.52□□□□□ -0.89
VMP1-210ENST00000589823 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
VMP1-210ENST00000589823 H7C1H1 209 aa9.51□□□□□ -0.89
VMP1-210ENST00000589823 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
VMP1-210ENST00000589823 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
VMP1-210ENST00000589823 APLNQ9ULZ1 77 aa9.51□□□□□ -0.89
VMP1-210ENST00000589823 TRBV10-1A0A0K0K1A3 114 aa9.5□□□□□ -0.89
VMP1-210ENST00000589823 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
VMP1-210ENST00000589823 SRIP30626 198 aa9.5□□□□□ -0.89
VMP1-210ENST00000589823 SUMO4Q6EEV6 95 aa9.5□□□□□ -0.89
VMP1-210ENST00000589823 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
VMP1-210ENST00000589823 PLECQ15149 4684 aaKnown RBP9.49□□□□□ -0.89
VMP1-210ENST00000589823 A0A096LPF7 62 aa9.49□□□□□ -0.89
VMP1-210ENST00000589823 P0DMU3 169 aa9.49□□□□□ -0.89
VMP1-210ENST00000589823 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
VMP1-210ENST00000589823 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
VMP1-210ENST00000589823 RPL36AP83881 106 aaKnown RBP9.49□□□□□ -0.89
VMP1-210ENST00000589823 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
VMP1-210ENST00000589823 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
VMP1-210ENST00000589823 GATD1Q8NB37 220 aa9.49□□□□□ -0.89
VMP1-210ENST00000589823 RPL36ALQ969Q0 106 aaKnown RBP9.49□□□□□ -0.89
VMP1-210ENST00000589823 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 RAB4AP20338 218 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 GAGE1Q13065 139 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 GAGE4Q13068 117 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 GAGE5Q13069 117 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 FAM104BQ5XKR9 115 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 NEGR1Q7Z3B1 354 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 FRZBQ92765 325 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 SMCO4Q9NRQ5 59 aa9.48□□□□□ -0.89
VMP1-210ENST00000589823 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 411.2 ms