RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 Q6ZSN1 163 aa9.79□□□□□ -0.84
DNMT1-217ENST00000589091 FRZBQ92765 325 aa9.79□□□□□ -0.84
DNMT1-217ENST00000589091 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 UMAD1C9J7I0 102 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 S100A9P06702 114 aaKnown RBP9.78□□□□□ -0.84
DNMT1-217ENST00000589091 SEC11BP0C7V7 166 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 ZFP82Q8N141 532 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 KCNRGQ8N5I3 272 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 Q8N814 137 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 SFRP2Q96HF1 295 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 JPT2Q9H910 190 aa9.78□□□□□ -0.84
DNMT1-217ENST00000589091 GRIFINA4D1Z8 144 aa9.77□□□□□ -0.85
DNMT1-217ENST00000589091 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.85
DNMT1-217ENST00000589091 C14orf178Q8N769 122 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-217ENST00000589091 TMEM70Q9BUB7 260 aa9.77□□□□□ -0.85
DNMT1-217ENST00000589091 SAMD10Q9BYL1 202 aa9.77□□□□□ -0.85
DNMT1-217ENST00000589091 A0A0D9SG52 128 aa9.76□□□□□ -0.85
DNMT1-217ENST00000589091 HMSDA8MTL9 139 aa9.76□□□□□ -0.85
DNMT1-217ENST00000589091 PAGE4O60829 102 aa9.76□□□□□ -0.85
DNMT1-217ENST00000589091 PFDN1O60925 122 aa9.76□□□□□ -0.85
DNMT1-217ENST00000589091 MBD3L1Q8WWY6 194 aa9.76□□□□□ -0.85
DNMT1-217ENST00000589091 COX11Q9Y6N1 276 aa9.76□□□□□ -0.85
DNMT1-217ENST00000589091 URGCP-MRPS24S4R325 110 aa9.76□□□□□ -0.85
DNMT1-217ENST00000589091 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 KANTRA0A1W2PQU2 76 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 M0R381 172 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 CXCL1P09341 107 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 EIF5AP63241 154 aaKnown RBP9.75□□□□□ -0.85
DNMT1-217ENST00000589091 Q5VSD8 79 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 FAM213BQ8TBF2 198 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 SFT2D1Q8WV19 159 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 RMI2Q96E14 147 aa9.75□□□□□ -0.85
DNMT1-217ENST00000589091 TMSB15BA0A087X1C1 80 aa9.74□□□□□ -0.85
DNMT1-217ENST00000589091 SMLR1H3BR10 107 aa9.74□□□□□ -0.85
DNMT1-217ENST00000589091 RPL36AP83881 106 aaKnown RBP9.74□□□□□ -0.85
DNMT1-217ENST00000589091 RPL36ALQ969Q0 106 aaKnown RBP9.74□□□□□ -0.85
DNMT1-217ENST00000589091 CHCHD7Q9BUK0 85 aa9.74□□□□□ -0.85
DNMT1-217ENST00000589091 ZNF471Q9BX82 626 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-217ENST00000589091 A0A087WWL8 130 aa9.73□□□□□ -0.85
DNMT1-217ENST00000589091 BCL2L11O43521 198 aa9.73□□□□□ -0.85
DNMT1-217ENST00000589091 C1QBP02746 253 aa9.73□□□□□ -0.85
DNMT1-217ENST00000589091 INAFM2P0DMQ5 153 aa9.73□□□□□ -0.85
DNMT1-217ENST00000589091 DAZ4Q86SG3 579 aaKnown RBP9.73□□□□□ -0.85
DNMT1-217ENST00000589091 DAZ3Q9NR90 486 aaKnown RBP9.73□□□□□ -0.85
DNMT1-217ENST00000589091 Q9UF83 564 aa9.73□□□□□ -0.85
DNMT1-217ENST00000589091 ELOBQ15370 118 aa9.72□□□□□ -0.85
DNMT1-217ENST00000589091 KCNIP4Q6PIL6 250 aa9.72□□□□□ -0.85
DNMT1-217ENST00000589091 NIT1Q86X76 327 aa9.72□□□□□ -0.85
DNMT1-217ENST00000589091 Q8N3U1 123 aa9.72□□□□□ -0.85
DNMT1-217ENST00000589091 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
DNMT1-217ENST00000589091 SCO2A0A1W2PP80 73 aa9.71□□□□□ -0.86
DNMT1-217ENST00000589091 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
DNMT1-217ENST00000589091 H2AFB1P0C5Y9 115 aa9.71□□□□□ -0.86
DNMT1-217ENST00000589091 BAGE2Q86Y30 109 aa9.71□□□□□ -0.86
DNMT1-217ENST00000589091 OR10G8Q8NGN5 311 aa9.71□□□□□ -0.86
DNMT1-217ENST00000589091 A0A087WX48 190 aa9.7□□□□□ -0.86
DNMT1-217ENST00000589091 A0A1B0GV50 99 aa9.7□□□□□ -0.86
DNMT1-217ENST00000589091 RAB4BP61018 213 aa9.7□□□□□ -0.86
DNMT1-217ENST00000589091 UBE2D3P61077 147 aa9.7□□□□□ -0.86
DNMT1-217ENST00000589091 UBE2D2P62837 147 aa9.7□□□□□ -0.86
DNMT1-217ENST00000589091 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-217ENST00000589091 MLST8Q9BVC4 326 aa9.7□□□□□ -0.86
DNMT1-217ENST00000589091 SNAI2O43623 268 aa9.69□□□□□ -0.86
DNMT1-217ENST00000589091 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-217ENST00000589091 OR5AL1P0C617 328 aa9.69□□□□□ -0.86
DNMT1-217ENST00000589091 ZNF56Q15929 161 aa9.69□□□□□ -0.86
DNMT1-217ENST00000589091 MANBALQ9NQG1 85 aa9.69□□□□□ -0.86
DNMT1-217ENST00000589091 RPL19P84098 196 aaKnown RBP9.68□□□□□ -0.86
DNMT1-217ENST00000589091 Q0VG73 95 aa9.68□□□□□ -0.86
DNMT1-217ENST00000589091 WFDC2Q14508 124 aa9.68□□□□□ -0.86
DNMT1-217ENST00000589091 SPANXN1Q5VSR9 72 aa9.68□□□□□ -0.86
DNMT1-217ENST00000589091 OR10AG1Q8NH19 301 aa9.68□□□□□ -0.86
DNMT1-217ENST00000589091 SSBP4Q9BWG4 385 aaPredicted RBP9.68□□□□□ -0.86
DNMT1-217ENST00000589091 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
DNMT1-217ENST00000589091 IGKV2D-24A0A075B6R9 120 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 TEX46H3BTG2 121 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 RAB5CP51148 216 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 PKIAP61925 76 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 PRR27Q6MZM9 219 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 TMUB2Q71RG4 321 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 Q8N976 141 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 NEXN-AS1Q8NBZ9 246 aa9.67□□□□□ -0.86
DNMT1-217ENST00000589091 TMA7Q9Y2S6 64 aaKnown RBP9.67□□□□□ -0.86
DNMT1-217ENST00000589091 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
DNMT1-217ENST00000589091 RPL35P42766 123 aaKnown RBP9.66□□□□□ -0.86
DNMT1-217ENST00000589091 TMEM97Q5BJF2 176 aa9.66□□□□□ -0.86
DNMT1-217ENST00000589091 EIF5AL1Q6IS14 154 aaKnown RBP9.66□□□□□ -0.86
DNMT1-217ENST00000589091 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
DNMT1-217ENST00000589091 BAALCQ8WXS3 180 aa9.66□□□□□ -0.86
DNMT1-217ENST00000589091 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
DNMT1-217ENST00000589091 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
DNMT1-217ENST00000589091 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-217ENST00000589091 TRAV1-1A0A0B4J248 108 aa9.65□□□□□ -0.86
DNMT1-217ENST00000589091 RBFOX3A6NFN3 312 aa9.65□□□□□ -0.86
DNMT1-217ENST00000589091 LECT2O14960 151 aa9.65□□□□□ -0.86
DNMT1-217ENST00000589091 SMIM17P0DL12 118 aa9.65□□□□□ -0.86
DNMT1-217ENST00000589091 HAMPP81172 84 aa9.65□□□□□ -0.86
DNMT1-217ENST00000589091 Q6ZSA8 131 aa9.65□□□□□ -0.86
DNMT1-217ENST00000589091 AP1S3Q96PC3 154 aa9.65□□□□□ -0.86
DNMT1-217ENST00000589091 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms