RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 OR10J3Q5JRS4 329 aa7.26□□□□□ -1.25
VPS4B-202ENST00000588059 EIF5AL1Q6IS14 154 aaKnown RBP7.26□□□□□ -1.25
VPS4B-202ENST00000588059 AKAP14Q86UN6 197 aa7.26□□□□□ -1.25
VPS4B-202ENST00000588059 ZC2HC1AQ96GY0 325 aa7.26□□□□□ -1.25
VPS4B-202ENST00000588059 TCEAL7Q9BRU2 100 aa7.26□□□□□ -1.25
VPS4B-202ENST00000588059 ZFP30Q9Y2G7 519 aa7.26□□□□□ -1.25
VPS4B-202ENST00000588059 BOLA1Q9Y3E2 137 aa7.26□□□□□ -1.25
VPS4B-202ENST00000588059 IGHV3-73A0A0B4J1V6 119 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 IGKV3D-20A0A0C4DH25 116 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 SCO2A0A1W2PP80 73 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 PGPEP1LA6NFU8 196 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 B4DEV8 164 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 M0R036 132 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 SH2D1AO60880 128 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 GATA1P15976 413 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-202ENST00000588059 Q8N3U1 123 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 CIRBP-AS1Q8TBR5 109 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 C9orf85Q96MD7 179 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 LRP2P98164 4655 aa7.25□□□□□ -1.25
VPS4B-202ENST00000588059 TRBV6-1A0A0K0K1D8 114 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 GRIFINA4D1Z8 144 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 RS1O15537 224 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 LTAP01374 205 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 RNASE3P12724 160 aaKnown RBP7.24□□□□□ -1.25
VPS4B-202ENST00000588059 CRIP1P50238 77 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 RAB5CP51148 216 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 HNRNPA3P51991 378 aaKnown RBP7.24□□□□□ -1.25
VPS4B-202ENST00000588059 ZNF506Q5JVG8 444 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 FAM162BQ5T6X4 162 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 LELP1Q5T871 98 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 CFAP126Q5VTH2 177 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 GNG13Q9P2W3 67 aa7.24□□□□□ -1.25
VPS4B-202ENST00000588059 TMSB15BA0A087X1C1 80 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 TEX46H3BTG2 121 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 H3BVH4 76 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 IGLV2-8P01709 118 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 S100A9P06702 114 aaKnown RBP7.23□□□□□ -1.25
VPS4B-202ENST00000588059 CCL20P78556 96 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 SLC51BQ86UW2 128 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 BAALCQ8WXS3 180 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 MANBALQ9NQG1 85 aa7.23□□□□□ -1.25
VPS4B-202ENST00000588059 TRAV8-3A0A0A6YYJ7 113 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 KRBOX1C9JBD0 128 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 CIDEAO60543 219 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 ARMS2P0C7Q2 107 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 MT1HL1P0DM35 61 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 SULT1A2P50226 295 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 ZNF674Q2M3X9 581 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 COX8CQ7Z4L0 72 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 BAGE2Q86Y30 109 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 SLC25A29Q8N8R3 303 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 PTH2Q96A98 100 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 PRADC1Q9BSG0 188 aa7.22□□□□□ -1.25
VPS4B-202ENST00000588059 TRAV1-1A0A0B4J248 108 aa7.21□□□□□ -1.26
VPS4B-202ENST00000588059 RBFOX3A6NFN3 312 aa7.21□□□□□ -1.26
VPS4B-202ENST00000588059 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.26
VPS4B-202ENST00000588059 RHOHQ15669 191 aa7.21□□□□□ -1.26
VPS4B-202ENST00000588059 GTSF1LQ9H1H1 148 aa7.21□□□□□ -1.26
VPS4B-202ENST00000588059 IL36BQ9NZH7 164 aa7.21□□□□□ -1.26
VPS4B-202ENST00000588059 TRBV6-4A0A1B0GX49 114 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 A8MWV9 139 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 IFNA1P01562 189 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 RPL35P42766 123 aaKnown RBP7.2□□□□□ -1.26
VPS4B-202ENST00000588059 LINC01559Q495D7 138 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 DMRTA1Q5VZB9 504 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 PRR27Q6MZM9 219 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 DAZ4Q86SG3 579 aaKnown RBP7.2□□□□□ -1.26
VPS4B-202ENST00000588059 C9orf62Q8N4C0 152 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 ATP6V0E2Q8NHE4 81 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
VPS4B-202ENST00000588059 PARLQ9H300 379 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 JPT2Q9H910 190 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 DAZ3Q9NR90 486 aaKnown RBP7.2□□□□□ -1.26
VPS4B-202ENST00000588059 PHLDA3Q9Y5J5 127 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 TNXBP22105 4242 aa7.2□□□□□ -1.26
VPS4B-202ENST00000588059 M0R381 172 aa7.19□□□□□ -1.26
VPS4B-202ENST00000588059 MGST1P10620 155 aaKnown RBP7.19□□□□□ -1.26
VPS4B-202ENST00000588059 RPL19P84098 196 aaKnown RBP7.19□□□□□ -1.26
VPS4B-202ENST00000588059 DNLZQ5SXM8 178 aa7.19□□□□□ -1.26
VPS4B-202ENST00000588059 Q8N976 141 aa7.19□□□□□ -1.26
VPS4B-202ENST00000588059 CENPWQ5EE01 88 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 TOR2AQ5JU69 321 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 PIK3CD-AS1Q5SR53 167 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 FAM74A4Q5TZK3 123 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 ZFP2Q6ZN57 461 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 ZFP82Q8N141 532 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 C11orf52Q96A22 123 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 DNAJC30Q96LL9 226 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 DERL1Q9BUN8 251 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 MLST8Q9BVC4 326 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 SAMD10Q9BYL1 202 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 COX11Q9Y6N1 276 aa7.18□□□□□ -1.26
VPS4B-202ENST00000588059 A0A087WWL8 130 aa7.17□□□□□ -1.26
VPS4B-202ENST00000588059 A0A1B0GVG6 124 aa7.17□□□□□ -1.26
VPS4B-202ENST00000588059 RAB19A4D1S5 217 aa7.17□□□□□ -1.26
VPS4B-202ENST00000588059 GAGE12JA6NER3 117 aa7.17□□□□□ -1.26
VPS4B-202ENST00000588059 RHODO00212 210 aa7.17□□□□□ -1.26
VPS4B-202ENST00000588059 BCL2P10415 239 aa7.17□□□□□ -1.26
VPS4B-202ENST00000588059 MEF2BQ02080 365 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-202ENST00000588059 GAGE1Q13065 139 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms