RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 C14orf178Q8N769 122 aaPredicted RBP7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 APLNQ9ULZ1 77 aa7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 HHLA3Q9XRX5 114 aa7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 MT-ND4LP03901 98 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 GATA1P15976 413 aaPredicted RBP7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 CRYBA4P53673 196 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 TWIST1Q15672 202 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 PRO0255Q9UI72 69 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 KIF25-AS1Q9Y6Z4 181 aa7.48□□□□□ -1.21
SMARCA4-213ENST00000587988 LOC100131303A0A0U1RQF7 123 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 C7orf77A4D0Y5 90 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 PAX4O43316 350 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 CIDEAO60543 219 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 APOC3P02656 99 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 EVI2AP22794 236 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 FAM3BP58499 235 aaPredicted RBP7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 LINC00315P59091 139 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 NDUFA5Q16718 116 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 SLC25A29Q8N8R3 303 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 CLRN3Q8NCR9 226 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 FAM210BQ96KR6 192 aa7.47□□□□□ -1.21
SMARCA4-213ENST00000587988 A0A1B0GUT8 65 aa7.46□□□□□ -1.22
SMARCA4-213ENST00000587988 RHODO00212 210 aa7.46□□□□□ -1.22
SMARCA4-213ENST00000587988 SLAQ13239 276 aa7.46□□□□□ -1.22
SMARCA4-213ENST00000587988 AP1S3Q96PC3 154 aa7.46□□□□□ -1.22
SMARCA4-213ENST00000587988 Q9UF83 564 aa7.46□□□□□ -1.22
SMARCA4-213ENST00000587988 PLECQ15149 4684 aaKnown RBP7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 TRBV6-4A0A1B0GX49 114 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 NUDT3O95989 172 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 MGPP08493 103 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 TRGC1P0CF51 173 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 P0DMU3 169 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 BORCS7Q96B45 105 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 RPS10P5Q9NQ39 176 aa7.45□□□□□ -1.22
SMARCA4-213ENST00000587988 A0A096LPF7 62 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 H3BNG1 76 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 K7EQD1 137 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 SMIM17P0DL12 118 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 GYPEP15421 78 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 RAB4BP61018 213 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 RIGQ13278 110 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 RHEBQ15382 184 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 ZNF56Q15929 161 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 MRPL54Q6P161 138 aaKnown RBP7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 SVBPQ8N300 66 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 C15orf53Q8NAA6 179 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 CTDSP1Q9GZU7 261 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 DPH3P1Q9H4G8 78 aa7.44□□□□□ -1.22
SMARCA4-213ENST00000587988 A0A087WWC5 75 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 F5H697 171 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 SNAPINO95295 136 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 TCTAP57738 103 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 RHOHQ15669 191 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 SUMO4Q6EEV6 95 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 ATRAIDQ6UW56 229 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 PRADC1Q9BSG0 188 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 TMEM242Q9NWH2 141 aa7.43□□□□□ -1.22
SMARCA4-213ENST00000587988 A0A1B0GXF2 115 aa7.42□□□□□ -1.22
SMARCA4-213ENST00000587988 CAMPP49913 170 aa7.42□□□□□ -1.22
SMARCA4-213ENST00000587988 RNF185Q96GF1 192 aa7.42□□□□□ -1.22
SMARCA4-213ENST00000587988 IMMP2LQ96T52 175 aa7.42□□□□□ -1.22
SMARCA4-213ENST00000587988 TMEM191AQ9H0A3 160 aa7.42□□□□□ -1.22
SMARCA4-213ENST00000587988 ICOSQ9Y6W8 199 aa7.42□□□□□ -1.22
SMARCA4-213ENST00000587988 TRAV26-2A0A0B4J265 109 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 GAGE12JA6NER3 117 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 M0QY20 66 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 GAGE1Q13065 139 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 GAGE4Q13068 117 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 GAGE5Q13069 117 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 MRPL23Q16540 153 aaKnown RBP7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 SMIM15Q7Z3B0 74 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 NEXN-AS1Q8NBZ9 246 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 URGCP-MRPS24S4R325 110 aa7.41□□□□□ -1.22
SMARCA4-213ENST00000587988 GAS8-AS1O95177 125 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 LINC00694P0DN24 101 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 RAB4AP20338 218 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 SRIP30626 198 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 HBBP68871 147 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 ESRGQ1W209 222 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 NEGR1Q7Z3B1 354 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 ATP5L2Q7Z4Y8 100 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 ZNRF2Q8NHG8 242 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 BTF3L4Q96K17 158 aa7.4□□□□□ -1.22
SMARCA4-213ENST00000587988 LYSTQ99698 3801 aa7.4□□□□□ -1.23
SMARCA4-213ENST00000587988 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
SMARCA4-213ENST00000587988 A0A1B0GW15 77 aa7.39□□□□□ -1.23
SMARCA4-213ENST00000587988 FAM104BQ5XKR9 115 aa7.39□□□□□ -1.23
SMARCA4-213ENST00000587988 KCNIP4Q6PIL6 250 aa7.39□□□□□ -1.23
SMARCA4-213ENST00000587988 LINC00588Q9Y4M8 146 aa7.39□□□□□ -1.23
SMARCA4-213ENST00000587988 TENM2Q9NT68 2774 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 TRBV7-3A0A075B6L6 115 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms