RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 FAM159AQ6UWV7 190 aa18.86■□□□□ 0.61
CAPNS1-204ENST00000587718 Q6ZQT7 251 aa18.86■□□□□ 0.61
CAPNS1-204ENST00000587718 IGKV3-7A0A075B6H7 116 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 RNASE3P12724 160 aaKnown RBP18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 RPL32P62910 135 aaKnown RBP18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 LAGE3Q14657 143 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 KHDC1LQ5JSQ8 128 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 LINC00482Q8N8I6 264 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 TCAPO15273 167 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 COX8AP10176 69 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 FOXI2Q6ZQN5 318 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 C4orf3Q8WVX3 66 aa18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 TIMM8BQ9Y5J9 83 aaPredicted RBP18.85■□□□□ 0.61
CAPNS1-204ENST00000587718 PEMTQ9UBM1 199 aa18.84■□□□□ 0.61
CAPNS1-204ENST00000587718 GAS8-AS1O95177 125 aa18.83■□□□□ 0.6
CAPNS1-204ENST00000587718 EDN2P20800 178 aa18.83■□□□□ 0.6
CAPNS1-204ENST00000587718 C18orf65Q6ZTR6 163 aa18.83■□□□□ 0.6
CAPNS1-204ENST00000587718 SMIM2Q9BVW6 85 aa18.83■□□□□ 0.6
CAPNS1-204ENST00000587718 LINC01619G3V211 115 aa18.82■□□□□ 0.6
CAPNS1-204ENST00000587718 J3KRW8 73 aa18.82■□□□□ 0.6
CAPNS1-204ENST00000587718 DEFB1P60022 68 aa18.82■□□□□ 0.6
CAPNS1-204ENST00000587718 ORMDL2Q53FV1 153 aa18.82■□□□□ 0.6
CAPNS1-204ENST00000587718 WFDC3Q8IUB2 231 aa18.82■□□□□ 0.6
CAPNS1-204ENST00000587718 LINC01549A6NIU2 74 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 A8MTW9 85 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 GATA1P15976 413 aaPredicted RBP18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 KRTAP10-11P60412 298 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 ZMAT4Q9H898 229 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 H0Y8G0 127 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 DLEU1O43261 78 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 ZNF688P0C7X2 276 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 EGFEM1PQ0D2K5 195 aa18.81■□□□□ 0.6
CAPNS1-204ENST00000587718 K7EIL1 84 aa18.8■□□□□ 0.6
CAPNS1-204ENST00000587718 GNRH2O43555 120 aa18.79■□□□□ 0.6
CAPNS1-204ENST00000587718 G0S2P27469 103 aa18.79■□□□□ 0.6
CAPNS1-204ENST00000587718 CDKN1BP46527 198 aa18.79■□□□□ 0.6
CAPNS1-204ENST00000587718 SUMO2P61956 95 aaKnown RBP18.79■□□□□ 0.6
CAPNS1-204ENST00000587718 GAGE1Q13065 139 aa18.79■□□□□ 0.6
CAPNS1-204ENST00000587718 C9orf85Q96MD7 179 aa18.78■□□□□ 0.6
CAPNS1-204ENST00000587718 KIF25-AS1Q9Y6Z4 181 aa18.78■□□□□ 0.6
CAPNS1-204ENST00000587718 SMIM17P0DL12 118 aa18.77■□□□□ 0.6
CAPNS1-204ENST00000587718 BATFQ16520 125 aa18.77■□□□□ 0.6
CAPNS1-204ENST00000587718 RASL10AQ92737 203 aa18.77■□□□□ 0.6
CAPNS1-204ENST00000587718 SIVA1O15304 175 aa18.76■□□□□ 0.59
CAPNS1-204ENST00000587718 ODF1Q14990 250 aa18.76■□□□□ 0.59
CAPNS1-204ENST00000587718 SYT8Q8NBV8 401 aa18.76■□□□□ 0.59
CAPNS1-204ENST00000587718 KLHL30-AS1Q8NEE0 82 aa18.76■□□□□ 0.59
CAPNS1-204ENST00000587718 MCRIP2Q9BUT9 160 aaKnown RBP18.76■□□□□ 0.59
CAPNS1-204ENST00000587718 C14orf178Q8N769 122 aaPredicted RBP18.75■□□□□ 0.59
CAPNS1-204ENST00000587718 STPG4Q8N801 248 aa18.75■□□□□ 0.59
CAPNS1-204ENST00000587718 TRAV26-2A0A0B4J265 109 aa18.74■□□□□ 0.59
CAPNS1-204ENST00000587718 IGHV3-16A0A0C4DH30 117 aa18.74■□□□□ 0.59
CAPNS1-204ENST00000587718 TFPI2P48307 235 aa18.74■□□□□ 0.59
CAPNS1-204ENST00000587718 ADAMTSL5Q6ZMM2 481 aa18.74■□□□□ 0.59
CAPNS1-204ENST00000587718 OR9G4Q8NGQ1 327 aa18.74■□□□□ 0.59
CAPNS1-204ENST00000587718 IGHV1OR15-1A0A075B7D0 117 aa18.73■□□□□ 0.59
CAPNS1-204ENST00000587718 TRAV12-1A0A0B4J245 112 aa18.73■□□□□ 0.59
CAPNS1-204ENST00000587718 TRAV12-3A0A0B4J271 114 aa18.73■□□□□ 0.59
CAPNS1-204ENST00000587718 LINC00315P59091 139 aa18.73■□□□□ 0.59
CAPNS1-204ENST00000587718 AMTNQ6UX39 209 aa18.73■□□□□ 0.59
CAPNS1-204ENST00000587718 RAX2Q96IS3 184 aa18.73■□□□□ 0.59
CAPNS1-204ENST00000587718 TRGV11A0A075B6L2 103 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 CD7P09564 240 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 HLA-DRB4P13762 266 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 FXYD7P58549 80 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 BOD1L2Q8IYS8 172 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 HLA-DRB4X5D2U9 266 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 PRSS1P07477 247 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 HINT1P49773 126 aaPredicted RBP18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 DUX3Q96PT4 197 aa18.72■□□□□ 0.59
CAPNS1-204ENST00000587718 FGF6P10767 208 aa18.71■□□□□ 0.59
CAPNS1-204ENST00000587718 ANKRD39Q53RE8 183 aa18.71■□□□□ 0.59
CAPNS1-204ENST00000587718 TOMM6Q96B49 74 aa18.71■□□□□ 0.59
CAPNS1-204ENST00000587718 TRBV6-5A0A0K0K1A5 114 aa18.7■□□□□ 0.58
CAPNS1-204ENST00000587718 CCL24O00175 119 aa18.7■□□□□ 0.58
CAPNS1-204ENST00000587718 DPM2O94777 84 aa18.7■□□□□ 0.58
CAPNS1-204ENST00000587718 NUDT3O95989 172 aa18.7■□□□□ 0.58
CAPNS1-204ENST00000587718 SLURP1P55000 103 aa18.7■□□□□ 0.58
CAPNS1-204ENST00000587718 OR11H1Q8NG94 326 aa18.7■□□□□ 0.58
CAPNS1-204ENST00000587718 TRAV25A0A0B4J276 109 aa18.69■□□□□ 0.58
CAPNS1-204ENST00000587718 IGKCP01834 107 aa18.69■□□□□ 0.58
CAPNS1-204ENST00000587718 MGPP08493 103 aa18.69■□□□□ 0.58
CAPNS1-204ENST00000587718 ORAOV1Q8WV07 137 aa18.69■□□□□ 0.58
CAPNS1-204ENST00000587718 C18orf15Q96N68 181 aa18.69■□□□□ 0.58
CAPNS1-204ENST00000587718 CLUHP3Q96NS8 147 aa18.69■□□□□ 0.58
CAPNS1-204ENST00000587718 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.68■□□□□ 0.58
CAPNS1-204ENST00000587718 PIK3CD-AS1Q5SR53 167 aa18.68■□□□□ 0.58
CAPNS1-204ENST00000587718 A0A087WX48 190 aa18.68■□□□□ 0.58
CAPNS1-204ENST00000587718 ZNF25P17030 456 aaPredicted RBP18.68■□□□□ 0.58
CAPNS1-204ENST00000587718 DEFB136Q30KP8 78 aa18.68■□□□□ 0.58
CAPNS1-204ENST00000587718 DKK2Q9UBU2 259 aa18.68■□□□□ 0.58
CAPNS1-204ENST00000587718 DEFB121Q5J5C9 76 aa18.67■□□□□ 0.58
CAPNS1-204ENST00000587718 BVES-AS1Q5T3Y7 98 aa18.67■□□□□ 0.58
CAPNS1-204ENST00000587718 TMEM208Q9BTX3 173 aa18.67■□□□□ 0.58
CAPNS1-204ENST00000587718 PLNP26678 52 aa18.66■□□□□ 0.58
CAPNS1-204ENST00000587718 C2orf91Q6ZV80 131 aa18.66■□□□□ 0.58
CAPNS1-204ENST00000587718 PTH2Q96A98 100 aa18.66■□□□□ 0.58
CAPNS1-204ENST00000587718 LINC00467Q9BRT7 94 aa18.66■□□□□ 0.58
CAPNS1-204ENST00000587718 MPV17L2Q567V2 206 aa18.65■□□□□ 0.58
CAPNS1-204ENST00000587718 HHLA3Q9XRX5 114 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms