RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 PF4P02776 101 aa10.42□□□□□ -0.74
LIG3-205ENST00000585941 RBMY1A1P0DJD3 496 aaKnown RBP10.42□□□□□ -0.74
LIG3-205ENST00000585941 RBMY1CP0DJD4 496 aa10.42□□□□□ -0.74
LIG3-205ENST00000585941 SUMO2P61956 95 aaKnown RBP10.42□□□□□ -0.74
LIG3-205ENST00000585941 LAGE3Q14657 143 aa10.42□□□□□ -0.74
LIG3-205ENST00000585941 RBMY1FQ15415 496 aaKnown RBP10.42□□□□□ -0.74
LIG3-205ENST00000585941 TRPT1Q86TN4 253 aaKnown RBP10.42□□□□□ -0.74
LIG3-205ENST00000585941 RASL10AQ92737 203 aa10.42□□□□□ -0.74
LIG3-205ENST00000585941 PTH2Q96A98 100 aa10.42□□□□□ -0.74
LIG3-205ENST00000585941 LINC00315P59091 139 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
LIG3-205ENST00000585941 ZNF415Q09FC8 603 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 BEAN1Q3B7T3 259 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 NDUFAF3Q9BU61 184 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 KRTAP10-3P60369 221 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 ZNF876PQ49A33 203 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 SPATA45Q537H7 98 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 ZNF705AQ6ZN79 300 aaPredicted RBP10.41□□□□□ -0.74
LIG3-205ENST00000585941 IFI27L1Q96BM0 104 aa10.41□□□□□ -0.74
LIG3-205ENST00000585941 FN1P02751 2386 aaKnown RBP10.4□□□□□ -0.74
LIG3-205ENST00000585941 C2CD3Q4AC94 2353 aa10.4□□□□□ -0.74
LIG3-205ENST00000585941 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
LIG3-205ENST00000585941 LINC00482Q8N8I6 264 aa10.4□□□□□ -0.74
LIG3-205ENST00000585941 LINC01587Q99440 93 aa10.4□□□□□ -0.74
LIG3-205ENST00000585941 MIEN1Q9BRT3 115 aa10.4□□□□□ -0.74
LIG3-205ENST00000585941 SPXQ9BT56 116 aa10.4□□□□□ -0.74
LIG3-205ENST00000585941 M0R2P5 195 aa10.39□□□□□ -0.75
LIG3-205ENST00000585941 G0S2P27469 103 aa10.39□□□□□ -0.75
LIG3-205ENST00000585941 HSBP1L1C9JCN9 74 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 F5H697 171 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 ATP5LO75964 103 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 INSL3P51460 131 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 TMEM158Q8WZ71 300 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 ST20Q9HBF5 79 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 CUBNO60494 3623 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 A0A087WWL8 130 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 CRYGDP07320 174 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 ATOH7Q8N100 152 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
LIG3-205ENST00000585941 JPT2Q9H910 190 aa10.38□□□□□ -0.75
LIG3-205ENST00000585941 A8MWV9 139 aa10.37□□□□□ -0.75
LIG3-205ENST00000585941 HTN1P15515 57 aa10.37□□□□□ -0.75
LIG3-205ENST00000585941 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
LIG3-205ENST00000585941 XCL2Q9UBD3 114 aa10.37□□□□□ -0.75
LIG3-205ENST00000585941 H0Y8G0 127 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 H7C1H1 209 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 TCAPO15273 167 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 NUDT3O95989 172 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 ZNF56Q15929 161 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 C14orf144Q96I85 54 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 C1QTNF4Q9BXJ3 329 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 EDA2RQ9HAV5 297 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 UQCR10Q9UDW1 63 aa10.36□□□□□ -0.75
LIG3-205ENST00000585941 VCYO14598 125 aa10.35□□□□□ -0.75
LIG3-205ENST00000585941 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
LIG3-205ENST00000585941 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
LIG3-205ENST00000585941 CSTL1Q9H114 145 aa10.35□□□□□ -0.75
LIG3-205ENST00000585941 C19orf73Q9NVV2 129 aa10.35□□□□□ -0.75
LIG3-205ENST00000585941 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 POLR2KP53803 58 aaKnown RBP10.34□□□□□ -0.75
LIG3-205ENST00000585941 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 GOLT1BQ9Y3E0 138 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 M0QY20 66 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 RHODO00212 210 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 IGLL1P15814 213 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 C9orf66Q5T8R8 295 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 KIR2DL4Q99706 377 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 CITED1Q99966 193 aa10.34□□□□□ -0.75
LIG3-205ENST00000585941 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
LIG3-205ENST00000585941 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
LIG3-205ENST00000585941 C1orf158Q8N1D5 194 aa10.33□□□□□ -0.76
LIG3-205ENST00000585941 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
LIG3-205ENST00000585941 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
LIG3-205ENST00000585941 C18orf15Q96N68 181 aa10.33□□□□□ -0.76
LIG3-205ENST00000585941 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
LIG3-205ENST00000585941 PRSS1P07477 247 aa10.32□□□□□ -0.76
LIG3-205ENST00000585941 MAJINQ3KP22 176 aa10.32□□□□□ -0.76
LIG3-205ENST00000585941 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
LIG3-205ENST00000585941 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
LIG3-205ENST00000585941 TMEM263Q8WUH6 116 aaKnown RBP10.31□□□□□ -0.76
LIG3-205ENST00000585941 MCRIP2Q9BUT9 160 aaKnown RBP10.31□□□□□ -0.76
LIG3-205ENST00000585941 hDV102S1A0JD36 115 aa10.3□□□□□ -0.76
LIG3-205ENST00000585941 CTAG1AP78358 180 aa10.3□□□□□ -0.76
LIG3-205ENST00000585941 UFSP1Q6NVU6 142 aa10.3□□□□□ -0.76
LIG3-205ENST00000585941 Q6ZN92 141 aa10.3□□□□□ -0.76
LIG3-205ENST00000585941 SCGB3A1Q96QR1 104 aa10.3□□□□□ -0.76
LIG3-205ENST00000585941 PMCHL2Q9BQD1 86 aa10.3□□□□□ -0.76
LIG3-205ENST00000585941 F8P00451 2351 aa10.29□□□□□ -0.76
LIG3-205ENST00000585941 CYSRT1A8MQ03 144 aa10.29□□□□□ -0.76
LIG3-205ENST00000585941 ODF1Q14990 250 aa10.29□□□□□ -0.76
LIG3-205ENST00000585941 CFAP126Q5VTH2 177 aa10.29□□□□□ -0.76
LIG3-205ENST00000585941 C2orf66Q6UXQ4 117 aa10.29□□□□□ -0.76
LIG3-205ENST00000585941 ZFP2Q6ZN57 461 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms