RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RNF212Q495C1 297 aa10.25□□□□□ -0.77
SCAMP4-209ENST00000585335 CNFNQ9BYD5 112 aa10.25□□□□□ -0.77
SCAMP4-209ENST00000585335 A0A087WWL8 130 aa10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 A0A0J9YY99 117 aa10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 GATA1P15976 413 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 NTF3P20783 257 aa10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 CRYBA4P53673 196 aa10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 PRADC1Q9BSG0 188 aa10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 JPT2Q9H910 190 aa10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 CARHSP1Q9Y2V2 147 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-209ENST00000585335 A0A1B0GUT8 65 aa10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 SMIM27A0A1W2PRY6 76 aa10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 NUDT3O95989 172 aa10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 RIGQ13278 110 aa10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 RHOHQ15669 191 aa10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 C10orf91Q5T1B1 145 aa10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 C14orf178Q8N769 122 aaPredicted RBP10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 SAMD10Q9BYL1 202 aa10.23□□□□□ -0.77
SCAMP4-209ENST00000585335 TRBV6-4A0A1B0GX49 114 aa10.22□□□□□ -0.77
SCAMP4-209ENST00000585335 ZNF56Q15929 161 aa10.22□□□□□ -0.77
SCAMP4-209ENST00000585335 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
SCAMP4-209ENST00000585335 CTDSP1Q9GZU7 261 aa10.22□□□□□ -0.77
SCAMP4-209ENST00000585335 APLNQ9ULZ1 77 aa10.22□□□□□ -0.77
SCAMP4-209ENST00000585335 ICOSQ9Y6W8 199 aa10.22□□□□□ -0.77
SCAMP4-209ENST00000585335 DNAH7Q8WXX0 4024 aa10.22□□□□□ -0.77
SCAMP4-209ENST00000585335 F5H697 171 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 CRYGDP07320 174 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 RAB4BP61018 213 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 RHEBQ15382 184 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 UFSP1Q6NVU6 142 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 SVBPQ8N300 66 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.77
SCAMP4-209ENST00000585335 A0A1B0GW15 77 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 K7EQD1 137 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 APOC3P02656 99 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 S100A8P05109 93 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 MGPP08493 103 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 GYPEP15421 78 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 SH2D6Q7Z4S9 175 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 SLC25A29Q8N8R3 303 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 CLRN3Q8NCR9 226 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 VSIG2Q96IQ7 327 aa10.2□□□□□ -0.78
SCAMP4-209ENST00000585335 SNAPINO95295 136 aa10.19□□□□□ -0.78
SCAMP4-209ENST00000585335 P0DMU3 169 aa10.19□□□□□ -0.78
SCAMP4-209ENST00000585335 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
SCAMP4-209ENST00000585335 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
SCAMP4-209ENST00000585335 SRIP30626 198 aa10.19□□□□□ -0.78
SCAMP4-209ENST00000585335 KCNIP4Q6PIL6 250 aa10.19□□□□□ -0.78
SCAMP4-209ENST00000585335 SLC7A5P1Q8MH63 180 aa10.19□□□□□ -0.78
SCAMP4-209ENST00000585335 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
SCAMP4-209ENST00000585335 A0A087WWC5 75 aa10.18□□□□□ -0.78
SCAMP4-209ENST00000585335 H7C1H1 209 aa10.18□□□□□ -0.78
SCAMP4-209ENST00000585335 EVI2AP22794 236 aa10.18□□□□□ -0.78
SCAMP4-209ENST00000585335 IMMP2LQ96T52 175 aa10.18□□□□□ -0.78
SCAMP4-209ENST00000585335 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 C7orf77A4D0Y5 90 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 S100PP25815 95 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 RPS10P5Q9NQ39 176 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 TMEM242Q9NWH2 141 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 KIF25-AS1Q9Y6Z4 181 aa10.17□□□□□ -0.78
SCAMP4-209ENST00000585335 A0A096LPF7 62 aa10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 CCL18P55774 89 aa10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 HBBP68871 147 aa10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 RPL36AP83881 106 aaKnown RBP10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 Q6ZSN1 163 aa10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 NEGR1Q7Z3B1 354 aa10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 RPL36ALQ969Q0 106 aaKnown RBP10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 BTF3L4Q96K17 158 aa10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 TMEM191AQ9H0A3 160 aa10.16□□□□□ -0.78
SCAMP4-209ENST00000585335 CAMPP49913 170 aa10.15□□□□□ -0.78
SCAMP4-209ENST00000585335 LGALS9CQ6DKI2 356 aa10.15□□□□□ -0.78
SCAMP4-209ENST00000585335 MRPL54Q6P161 138 aaKnown RBP10.15□□□□□ -0.78
SCAMP4-209ENST00000585335 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.15□□□□□ -0.78
SCAMP4-209ENST00000585335 TRAV9-1A0A075B6T8 112 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 LOC100131303A0A0U1RQF7 123 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 FAM3BP58499 235 aaPredicted RBP10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 LINC00315P59091 139 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 GAGE1Q13065 139 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 GAGE4Q13068 117 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 GAGE5Q13069 117 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 GAGE13Q4V321 117 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 SUMO4Q6EEV6 95 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 FRZBQ92765 325 aa10.14□□□□□ -0.79
SCAMP4-209ENST00000585335 STARD9Q9P2P6 4700 aa10.13□□□□□ -0.79
SCAMP4-209ENST00000585335 LY6G6CO95867 125 aa10.13□□□□□ -0.79
SCAMP4-209ENST00000585335 RASL11AQ6T310 242 aa10.13□□□□□ -0.79
SCAMP4-209ENST00000585335 ATP6V0E2Q8NHE4 81 aa10.13□□□□□ -0.79
SCAMP4-209ENST00000585335 LINC00476Q8WZB0 136 aa10.13□□□□□ -0.79
SCAMP4-209ENST00000585335 TNFRSF18Q9Y5U5 241 aa10.13□□□□□ -0.79
SCAMP4-209ENST00000585335 ZNRF2Q8NHG8 242 aa10.12□□□□□ -0.79
SCAMP4-209ENST00000585335 MRAP2Q96G30 205 aa10.12□□□□□ -0.79
SCAMP4-209ENST00000585335 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
SCAMP4-209ENST00000585335 TRBV7-3A0A075B6L6 115 aa10.11□□□□□ -0.79
SCAMP4-209ENST00000585335 LCE6AA0A183 80 aa10.11□□□□□ -0.79
SCAMP4-209ENST00000585335 A0A1B0GXF2 115 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms