RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TRGV2A0A075B6R0 118 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 A8MWV9 139 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 M0R381 172 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 S100A8P05109 93 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 DEFB130BP0DP73 79 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 DEFB130AP0DP74 79 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 HBBP68871 147 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 RIGQ13278 110 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
CDRT1-207ENST00000583965 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
CDRT1-207ENST00000583965 TRAV4A0A0B4J268 109 aa8.28□□□□□ -1.08
CDRT1-207ENST00000583965 CIDEAO60543 219 aa8.28□□□□□ -1.08
CDRT1-207ENST00000583965 C12orf74Q32Q52 190 aa8.28□□□□□ -1.08
CDRT1-207ENST00000583965 FRZBQ92765 325 aa8.28□□□□□ -1.08
CDRT1-207ENST00000583965 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 ATP5G1P05496 136 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 NTF3P20783 257 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 AP1S3Q96PC3 154 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
CDRT1-207ENST00000583965 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
CDRT1-207ENST00000583965 MUC21A0A0G2JKD1 596 aa8.26□□□□□ -1.09
CDRT1-207ENST00000583965 MUC21A0A140T8X8 626 aa8.26□□□□□ -1.09
CDRT1-207ENST00000583965 RHODO00212 210 aa8.26□□□□□ -1.09
CDRT1-207ENST00000583965 RS1O15537 224 aa8.26□□□□□ -1.09
CDRT1-207ENST00000583965 NANOS2P60321 138 aaKnown RBP8.26□□□□□ -1.09
CDRT1-207ENST00000583965 CFAP126Q5VTH2 177 aa8.26□□□□□ -1.09
CDRT1-207ENST00000583965 OR4C5Q8NGB2 326 aa8.26□□□□□ -1.09
CDRT1-207ENST00000583965 TWIST1Q15672 202 aa8.25□□□□□ -1.09
CDRT1-207ENST00000583965 COA6Q5JTJ3 125 aaKnown RBP8.25□□□□□ -1.09
CDRT1-207ENST00000583965 ZFP2Q6ZN57 461 aa8.25□□□□□ -1.09
CDRT1-207ENST00000583965 Q6ZTC4 211 aa8.25□□□□□ -1.09
CDRT1-207ENST00000583965 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
CDRT1-207ENST00000583965 POM121L12Q8N7R1 296 aa8.25□□□□□ -1.09
CDRT1-207ENST00000583965 DNAH7Q8WXX0 4024 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 TRAV10A0A0B4J240 114 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 APCSP02743 223 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 SMIM17P0DL12 118 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 CAMPP49913 170 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 RAB4BP61018 213 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 SSTP61278 116 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 SLAQ13239 276 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 WWC2-AS2Q96NR7 200 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 JPT2Q9H910 190 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 MSRB1Q9NZV6 116 aa8.24□□□□□ -1.09
CDRT1-207ENST00000583965 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 C5orf52A6NGY3 159 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 S100A6P06703 90 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 CRYGDP07320 174 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 UFSP1Q6NVU6 142 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 ZNF479Q96JC4 524 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
CDRT1-207ENST00000583965 TRGV4A0A0C4DH28 118 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 LOC105371267A0A1B0GV96 52 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 IGHV3-53P01767 116 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 HTN3P15516 51 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 Q0VG73 95 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 C14orf178Q8N769 122 aaPredicted RBP8.22□□□□□ -1.09
CDRT1-207ENST00000583965 PHLDA1Q8WV24 401 aaPredicted RBP8.22□□□□□ -1.09
CDRT1-207ENST00000583965 SAMD10Q9BYL1 202 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 KIF25-AS1Q9Y6Z4 181 aa8.22□□□□□ -1.09
CDRT1-207ENST00000583965 A0A087WWL8 130 aa8.21□□□□□ -1.1
CDRT1-207ENST00000583965 F5H768 121 aa8.21□□□□□ -1.1
CDRT1-207ENST00000583965 GATA1P15976 413 aaPredicted RBP8.21□□□□□ -1.1
CDRT1-207ENST00000583965 HOXA5P20719 270 aa8.21□□□□□ -1.1
CDRT1-207ENST00000583965 EVI2AP22794 236 aa8.21□□□□□ -1.1
CDRT1-207ENST00000583965 FHL2Q14192 279 aa8.21□□□□□ -1.1
CDRT1-207ENST00000583965 FAM104BQ5XKR9 115 aa8.21□□□□□ -1.1
CDRT1-207ENST00000583965 PRO0255Q9UI72 69 aa8.21□□□□□ -1.1
CDRT1-207ENST00000583965 TRBV6-4A0A1B0GX49 114 aa8.2□□□□□ -1.1
CDRT1-207ENST00000583965 NUPR2A6NF83 97 aa8.2□□□□□ -1.1
CDRT1-207ENST00000583965 NDUFA6P56556 154 aa8.2□□□□□ -1.1
CDRT1-207ENST00000583965 ZNF56Q15929 161 aa8.2□□□□□ -1.1
CDRT1-207ENST00000583965 OR10J3Q5JRS4 329 aa8.2□□□□□ -1.1
CDRT1-207ENST00000583965 MUC7Q8TAX7 377 aa8.2□□□□□ -1.1
CDRT1-207ENST00000583965 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
CDRT1-207ENST00000583965 HHLA3Q9XRX5 114 aa8.2□□□□□ -1.1
CDRT1-207ENST00000583965 IGHV3-73A0A0B4J1V6 119 aa8.19□□□□□ -1.1
CDRT1-207ENST00000583965 H3BNG1 76 aa8.19□□□□□ -1.1
CDRT1-207ENST00000583965 MGPP08493 103 aa8.19□□□□□ -1.1
CDRT1-207ENST00000583965 SRIP30626 198 aa8.19□□□□□ -1.1
CDRT1-207ENST00000583965 CRYBA4P53673 196 aa8.19□□□□□ -1.1
CDRT1-207ENST00000583965 LINC00315P59091 139 aa8.19□□□□□ -1.1
CDRT1-207ENST00000583965 SNRPEP62304 92 aaKnown RBP8.19□□□□□ -1.1
CDRT1-207ENST00000583965 CEMP1Q6PRD7 247 aaPredicted RBP8.19□□□□□ -1.1
CDRT1-207ENST00000583965 TENM2Q9NT68 2774 aa8.19□□□□□ -1.1
CDRT1-207ENST00000583965 F5H697 171 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 H7C1H1 209 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms