RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 MSRB1Q9NZV6 116 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 FAM30AQ9NZY2 134 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 EPDR1Q9UM22 224 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 KLF12Q9Y4X4 402 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 DNAH8Q96JB1 4490 aa5.15□□□□□ -1.59
CCDC47-205ENST00000582331 PGPA6NDG6 321 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 PEX7O00628 323 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 OXTP01178 125 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 SNRPCP09234 159 aaKnown RBP5.14□□□□□ -1.59
CCDC47-205ENST00000582331 TRGC1P0CF51 173 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 HIST1H1EP10412 219 aaKnown RBP5.14□□□□□ -1.59
CCDC47-205ENST00000582331 S100A7P31151 101 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 RANP62826 216 aaKnown RBP5.14□□□□□ -1.59
CCDC47-205ENST00000582331 GNG5P63218 68 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 LINC00518Q8N0U6 118 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 NTN5Q8WTR8 489 aaPredicted RBP5.14□□□□□ -1.59
CCDC47-205ENST00000582331 LINC00479Q96M42 142 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 OSTCQ9NRP0 149 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 V9GYV3 84 aa5.14□□□□□ -1.59
CCDC47-205ENST00000582331 LRP1Q07954 4544 aaKnown RBP5.14□□□□□ -1.59
CCDC47-205ENST00000582331 TRGV2A0A075B6R0 118 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 TRAV9-1A0A075B6T8 112 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 TRAV34A0A0B4J273 112 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 H3BTX0 84 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 K7EP13 123 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 SLC17A3O00476 420 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 SLC25A5P05141 298 aaKnown RBP5.13□□□□□ -1.59
CCDC47-205ENST00000582331 S100A6P06703 90 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 EVI2AP22794 236 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 NDUFA6P56556 154 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 FABP9Q0Z7S8 132 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 DAZ2Q13117 558 aaKnown RBP5.13□□□□□ -1.59
CCDC47-205ENST00000582331 PSG3Q16557 428 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 TMEM183BQ1AE95 376 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 KCNIP4Q6PIL6 250 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 LYPD5Q6UWN5 251 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 Q6ZTI0 123 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 C5orf17Q8NAS9 161 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 BLNKQ8WV28 456 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 OTORQ9NRC9 128 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 IL36BQ9NZH7 164 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 ICOSQ9Y6W8 199 aa5.13□□□□□ -1.59
CCDC47-205ENST00000582331 FAT3Q8TDW7 4589 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 TRBV19A0A075B6N1 114 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 TRBV6-1A0A0K0K1D8 114 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 IFITM10A6NMD0 228 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 PSCAO43653 123 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 ZNF324O75467 553 aaPredicted RBP5.12□□□□□ -1.59
CCDC47-205ENST00000582331 TCRAP04437 139 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 S100A9P06702 114 aaKnown RBP5.12□□□□□ -1.59
CCDC47-205ENST00000582331 IGLC2P0DOY2 106 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 PRB4P10163 310 aaPredicted RBP5.12□□□□□ -1.59
CCDC47-205ENST00000582331 AKR1D1P51857 326 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 FAM231DQ6ZW35 169 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 BAGE2Q86Y30 109 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 BPIFA4PQ86YQ2 179 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 BTF3L4Q96K17 158 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 LINC00467Q9BRT7 94 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 MLST8Q9BVC4 326 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 RNF24Q9Y225 148 aa5.12□□□□□ -1.59
CCDC47-205ENST00000582331 LRCOL1A6NCL2 159 aa5.11□□□□□ -1.59
CCDC47-205ENST00000582331 IGLV2-11P01706 119 aa5.11□□□□□ -1.59
CCDC47-205ENST00000582331 RPL7P18124 248 aaKnown RBP5.11□□□□□ -1.59
CCDC47-205ENST00000582331 MRPL23Q16540 153 aaKnown RBP5.11□□□□□ -1.59
CCDC47-205ENST00000582331 COA6Q5JTJ3 125 aaKnown RBP5.11□□□□□ -1.59
CCDC47-205ENST00000582331 GFI1BQ5VTD9 330 aa5.11□□□□□ -1.59
CCDC47-205ENST00000582331 NUDT10Q8NFP7 164 aa5.11□□□□□ -1.59
CCDC47-205ENST00000582331 NUDT11Q96G61 164 aa5.11□□□□□ -1.59
CCDC47-205ENST00000582331 RNASE7Q9H1E1 156 aaKnown RBP5.11□□□□□ -1.59
CCDC47-205ENST00000582331 A0A087X0K7 114 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 TRGV1A0A0A0MS02 117 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 TRAV12-3A0A0B4J271 114 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 SMIM27A0A1W2PRY6 76 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 LTAP01374 205 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 S100A8P05109 93 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 MGST1P10620 155 aaKnown RBP5.1□□□□□ -1.59
CCDC47-205ENST00000582331 SLAQ13239 276 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 NEGR1Q7Z3B1 354 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 S100A7AQ86SG5 101 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 WFDC10BQ8IUB3 73 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 HIST3H2BBQ8N257 126 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 EXOC3-AS1Q8N2X6 119 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 Q8N814 137 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 NHLRC2Q8NBF2 726 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 SMIM12Q96EX1 92 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 ZNF492Q9P255 531 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 PRO0255Q9UI72 69 aa5.1□□□□□ -1.59
CCDC47-205ENST00000582331 C19orf71A6NCJ1 209 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 J3KRW8 73 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 GATCO43716 136 aaKnown RBP5.09□□□□□ -1.59
CCDC47-205ENST00000582331 IGHV3-53P01767 116 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 CRYGDP07320 174 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 CRYBA4P53673 196 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 UBE2G1P62253 170 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 PDE6HQ13956 83 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 IBA57Q5T440 356 aaKnown RBP5.09□□□□□ -1.59
CCDC47-205ENST00000582331 Q6ZSA8 131 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 Q86TA4 180 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 C10orf126Q8N4M7 172 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 ARL6IP6Q8N6S5 226 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms